RNA–Protein interactions for RNA: ENST00000600259.5

VRK3-220, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-220ENST00000600259 TRMT6Q9UJA5 497 aaKnown RBP5.66□□□□□ -1.5
VRK3-220ENST00000600259 PLEKHA6Q9Y2H5 1048 aa5.66□□□□□ -1.5
VRK3-220ENST00000600259 COL6A5A8TX70 2615 aa5.66□□□□□ -1.5
VRK3-220ENST00000600259 ZANQ9Y493 2812 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 A0A0G2JN53 185 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 MYOCOSA0A1B0GUC4 107 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 LRIT2A6NDA9 550 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 A6NNC1 897 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 A8MVJ9 347 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 KDM4EB2RXH2 506 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 G3V3Y1 287 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 GOLGA8MH3BSY2 632 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 PSMD12O00232 456 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 WWP2O00308 870 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 BCKDKO14874 412 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CTNSO60931 367 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 WDR1O75083 606 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 KRT14P02533 472 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HIST1H2AGP0C0S8 130 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 RFPL3SP0C7P2 107 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CCL3P10147 92 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HIST1H2ADP20671 130 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HNRNPH1P31943 449 aaKnown RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 CEACAM8P31997 349 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 MAGEA5P43359 124 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 KIR2DL3P43628 341 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 VPS41P49754 854 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 RGS4P49798 205 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 IL2P60568 153 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SKP1P63208 163 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 BTN3A2P78410 334 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 LTBQ06643 244 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SLC10A1Q14973 349 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ZNF791Q3KP31 576 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 BBS9Q3SYG4 887 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 PIGGQ5H8A4 983 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 TOR1AIP1Q5JTV8 583 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 RIPPLY2Q5TAB7 128 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 NDUFAF5Q5TEU4 345 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HECTD2Q5U5R9 776 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ZNF585AQ6P3V2 769 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SLCO4C1Q6ZQN7 724 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 VN1R5Q7Z5H4 357 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SLC22A16Q86VW1 577 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 THOC6Q86W42 341 aaKnown RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 IGDCC3Q8IVU1 814 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CNTN4Q8IWV2 1026 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ZNF595Q8IYB9 648 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 KLHDC8AQ8IYD2 350 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 FAM109AQ8N4B1 249 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 GOLM1Q8NBJ4 401 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 RELL2Q8NC24 303 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 NAXEQ8NCW5 288 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ARMC2Q8NEN0 867 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 MYRIPQ8NFW9 859 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 OR8K3Q8NH51 312 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CALML6Q8TD86 181 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 MAIP1Q8WWC4 291 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SLCO2A1Q92959 643 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 NTNG2Q96CW9 530 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ARSGQ96EG1 525 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 LINGO1Q96FE5 620 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SCYL1Q96KG9 808 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HIST1H2AHQ96KK5 128 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SGCZQ96LD1 299 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 TSNARE1Q96NA8 513 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 HIST1H2AJQ99878 128 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SH3GL2Q99962 352 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 FAM173AQ9BQD7 235 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 H2AFJQ9BTM1 129 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CLEC4MQ9H2X3 399 aaPredicted RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 PLEKHF2Q9H8W4 249 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 XAB2Q9HCS7 855 aaKnown RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 ADAP2Q9NPF8 381 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 PRDM7Q9NQW5 492 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 PRTFDC1Q9NRG1 225 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 IARS2Q9NSE4 1012 aaKnown RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 HPF1Q9NWY4 346 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 TRMT1Q9NXH9 659 aaKnown RBP5.65□□□□□ -1.5
VRK3-220ENST00000600259 ARL15Q9NXU5 204 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SAMD15Q9P1V8 674 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SPRR3Q9UBC9 169 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 VTI1BQ9UEU0 232 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 CBLCQ9ULV8 474 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 GUCA1BQ9UMX6 200 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ERVK-11Q9UQG0 969 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 SLC22A14Q9Y267 594 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 VWA7Q9Y334 891 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 ATG4BQ9Y4P1 393 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 PCDHGB3Q9Y5G1 929 aa5.65□□□□□ -1.5
VRK3-220ENST00000600259 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.51
VRK3-220ENST00000600259 STAB1Q9NY15 2570 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ATRQ13535 2644 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 CSPG4Q6UVK1 2322 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 MPDZO75970 2070 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 TLN2Q9Y4G6 2542 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 ATP6AP2A0A1C7CYW4 349 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 A0A1W2PPR1 153 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 URADA6NGE7 173 aa5.64□□□□□ -1.51
VRK3-220ENST00000600259 FIGNL2A6NMB9 653 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms