RNA–Protein interactions for RNA: ENST00000596482.5

HOMER3-209, Transcript of homer scaffold protein 3, humanhuman

TSL 5

Gene HOMER3, Length 866 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-209ENST00000596482 SHBGP04278 402 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 GSTA1P08263 222 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 PYGBP11216 843 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 ZRSR2Q15696 482 aaKnown RBP17.98■□□□□ 0.47
HOMER3-209ENST00000596482 DEPDC1Q5TB30 811 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 UBE3DQ7Z6J8 389 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 CLNKQ7Z7G1 428 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 RNF175Q8N4F7 328 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 CISD2Q8N5K1 135 aaKnown RBP17.98■□□□□ 0.47
HOMER3-209ENST00000596482 SUN3Q8TAQ9 357 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 SNRNP40Q96DI7 357 aaKnown RBP17.98■□□□□ 0.47
HOMER3-209ENST00000596482 NTMT1Q9BV86 223 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.98■□□□□ 0.473e-6■■□□□ 11.6
HOMER3-209ENST00000596482 TMEM216Q9P0N5 145 aa17.98■□□□□ 0.47
HOMER3-209ENST00000596482 COPG1Q9Y678 874 aaKnown RBP17.98■□□□□ 0.47
HOMER3-209ENST00000596482 DOCK10Q96BY6 2186 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 TRAV17A0A0B4J275 112 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 BLACEA4D250 179 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 A8MUA0 341 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 GLRA3O75311 464 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 MYO1DO94832 1006 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 SLU7O95391 586 aaKnown RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 WDPCPO95876 746 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 KRT15P19012 456 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 PTX3P26022 381 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 SLCO1A2P46721 670 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 HNRNPFP52597 415 aaKnown RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 HERVK_113P63132 956 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 IFT88Q13099 833 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 TRAF3Q13114 568 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 TERF2Q15554 542 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 MEP1AQ16819 746 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 GGTA1PQ4G0N0 100 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 ACER2Q5QJU3 275 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 C10orf62Q5T681 223 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 OR4C11Q6IEV9 310 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 AMER2Q8N7J2 671 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 TMEM52Q8NDY8 209 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 WDR20Q8TBZ3 569 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 ZNF483Q8TF39 744 aaPredicted RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 HAS2Q92819 552 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 MAPKAP1Q9BPZ7 522 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 ERVK-6Q9BXR3 956 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 ZBTB26Q9HCK0 441 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 ADAP2Q9NPF8 381 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 PNO1Q9NRX1 252 aaKnown RBP17.97■□□□□ 0.47
HOMER3-209ENST00000596482 PLA2G3Q9NZ20 509 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 STMN3Q9NZ72 180 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 PHF11Q9UIL8 331 aa17.97■□□□□ 0.47
HOMER3-209ENST00000596482 OR5H15A6NDH6 313 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 FOXE1O00358 373 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CYR61O00622 381 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 PLPP1O14494 284 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 ZIC2O95409 532 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-209ENST00000596482 F10P00742 488 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 SBK3P0C264 359 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CPN2P22792 545 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 ATP5F1P24539 256 aaPredicted RBP17.96■□□□□ 0.47
HOMER3-209ENST00000596482 TNFSF10P50591 281 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 ARFIP1P53367 373 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 VSNL1P62760 191 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CUL3Q13618 768 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 FRG2Q64ET8 278 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 FCRLBQ6BAA4 426 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 MILR1Q7Z6M3 343 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 TDRPQ86YL5 185 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CRLF3Q8IUI8 442 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 SLC22A9Q8IVM8 553 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 BEST3Q8N1M1 668 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CATSPER1Q8NEC5 780 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 OR1N1Q8NGS0 311 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 MZB1Q8WU39 189 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 FRG2BQ96QU4 278 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 SERPINI1Q99574 410 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 SORBS1Q9BX66 1292 aaKnown RBP17.96■□□□□ 0.47
HOMER3-209ENST00000596482 C1QTNF3Q9BXJ4 246 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 ELOVL6Q9H5J4 265 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 AGPAT4Q9NRZ5 378 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 ASF1BQ9NVP2 202 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 MS4A12Q9NXJ0 267 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 FBXW2Q9UKT8 454 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CPAMD8Q8IZJ3 1885 aa17.96■□□□□ 0.47
HOMER3-209ENST00000596482 CDH16O75309 829 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 IFNA16P05015 189 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 HSD17B3P37058 310 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 STX4Q12846 297 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 SLAMF1Q13291 335 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 INAQ16352 499 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 H3F3CQ6NXT2 135 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 FAM180AQ6UWF9 173 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 RPS27LQ71UM5 84 aaKnown RBP17.95■□□□□ 0.46
HOMER3-209ENST00000596482 NUDT13Q86X67 352 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 LGI4Q8N135 537 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 ZCCHC7Q8N3Z6 543 aaKnown RBP17.95■□□□□ 0.46
HOMER3-209ENST00000596482 TMEM151AQ8N4L1 468 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 KIF2BQ8N4N8 673 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 B3GNT7Q8NFL0 401 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 OR4F6Q8NGB9 312 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 ELP5Q8TE02 316 aa17.95■□□□□ 0.46
HOMER3-209ENST00000596482 EPS8L3Q8TE67 593 aaKnown RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms