RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 CRTC2Q53ET0 693 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 ARHGAP40Q5TG30 622 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 C18orf63Q68DL7 685 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 TRIM40Q6P9F5 258 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 TMEM205Q6UW68 189 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 PPP1R32Q7Z5V6 425 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 CLNKQ7Z7G1 428 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 SCUBE1Q8IWY4 988 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 C1orf52Q8N6N3 182 aaKnown RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 PLPP5Q8NEB5 264 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 ANKRD9Q96BM1 317 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 SLC7A5P2Q9GIP4 190 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 VN1R1Q9GZP7 353 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 ILKAPQ9H0C8 392 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 SOX17Q9H6I2 414 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 GPN2Q9H9Y4 310 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 EML4Q9HC35 981 aaKnown RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 CPNE5Q9HCH3 593 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 MKKSQ9NPJ1 570 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 NECTIN3Q9NQS3 549 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 INTS9Q9NV88 658 aaKnown RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 TEX10Q9NXF1 929 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 ZNF282Q9UDV7 671 aaPredicted RBP9.96□□□□□ -0.82
LIG1-210ENST00000596332 ADAM29Q9UKF5 820 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 CES1P1Q9UKY3 287 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 DLGAP4Q9Y2H0 992 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 FIS1Q9Y3D6 152 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 PKD1L2Q7Z442 2459 aa9.96□□□□□ -0.82
LIG1-210ENST00000596332 LOC102723996A0A087X1L8 192 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 A0A1W2PS29 197 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 K7ENP7 123 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 PGRMC2O15173 223 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 PRKRAO75569 313 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 RSL1D1O76021 490 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 KLK1P06870 262 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 FHP07954 510 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 FAM58BPP0C7Q3 252 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 TACR1P25103 407 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 RAB38P57729 211 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 AP5B1Q2VPB7 878 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 C6orf136Q5SQH8 315 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 INO80CQ6PI98 192 aaPredicted RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 KIRREL2Q6UWL6 708 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 LARP4Q71RC2 724 aaKnown RBP eCLIP9.95□□□□□ -0.82
LIG1-210ENST00000596332 WDR75Q8IWA0 830 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 PRSS58Q8IYP2 241 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 GOLGA6L1Q8N7Z2 621 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 SRFBP1Q8NEF9 429 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 NUDT8Q8WV74 236 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 STARD8Q92502 1023 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 TBC1D20Q96BZ9 403 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 MAELQ96JY0 434 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 EGLN2Q96KS0 407 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 MAGEB18Q96M61 343 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 C7orf26Q96N11 449 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 DCBLD2Q96PD2 775 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 OR1F2PQ96R84 312 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 WDR77Q9BQA1 342 aaPredicted RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 RBCK1Q9BYM8 510 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 ACBD3Q9H3P7 528 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 PRORYQ9H606 182 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 LYRM4Q9HD34 91 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 HEY2Q9UBP5 337 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 KCND3Q9UK17 655 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 PTRH2Q9Y3E5 179 aaKnown RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 HS3ST3B1Q9Y662 390 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 PTPRQQ9UMZ3 2332 aa9.95□□□□□ -0.82
LIG1-210ENST00000596332 KMT2BQ9UMN6 2715 aaPredicted RBP9.95□□□□□ -0.82
LIG1-210ENST00000596332 EPG5Q9HCE0 2579 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 ATP6AP2A0A1C7CYW4 349 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 IDSB3KWA1 339 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 SDHDO14521 159 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 B3GALT2O43825 422 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 ATP6AP2O75787 350 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 SNUPNO95149 360 aaKnown RBP9.94□□□□□ -0.82
LIG1-210ENST00000596332 PIM1P11309 404 aaPredicted RBP9.94□□□□□ -0.82
LIG1-210ENST00000596332 RNH1P13489 461 aaKnown RBP9.94□□□□□ -0.82
LIG1-210ENST00000596332 IL10P22301 178 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MMP11P24347 488 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 SSR2P43308 183 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 RPS15P62841 145 aaKnown RBP9.94□□□□□ -0.82
LIG1-210ENST00000596332 IGLV3-21P80748 117 aaPredicted RBP9.94□□□□□ -0.82
LIG1-210ENST00000596332 GUCY1A3Q02108 690 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 Q0VFX4 171 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 SSPNQ14714 243 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 UGT8Q16880 541 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 TUBB8Q3ZCM7 444 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 VWA5B1Q5TIE3 1220 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 ATG16L1Q676U5 607 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 CGB2Q6NT52 195 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 NIPAL1Q6NVV3 410 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 LANCL3Q6ZV70 420 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 GPR180Q86V85 440 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 PPP1R14CQ8TAE6 165 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 DNAJB14Q8TBM8 379 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 TSLPQ969D9 159 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 MIEF2Q96C03 454 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 FAR2Q96K12 515 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 ROGDIQ9GZN7 287 aa9.94□□□□□ -0.82
LIG1-210ENST00000596332 CCDC134Q9H6E4 229 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 495.9 ms