RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 SEMA3DO95025 777 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 GASTP01350 101 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 CYP2A6P11509 494 aaPredicted RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 PSMA1P25786 263 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 CD70P32970 193 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 RPS19P39019 145 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 RFX2P48378 723 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 RPS13P62277 151 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 MLLT11Q13015 90 aaPredicted RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 ASAH1Q13510 395 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 CDK10Q15131 360 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 SPHARQ15513 63 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ARMC4Q5T2S8 1044 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 FAM71E1Q6IPT2 247 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ERAP2Q6P179 960 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ANGPTL8Q6UXH0 198 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 IKBIPQ70UQ0 350 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 NRARPQ7Z6K4 114 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 TRAM1L1Q8N609 369 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 ARL14EPQ8N8R7 260 aaPredicted RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 PROKR2Q8NFJ6 384 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 OR9Q1Q8NGQ5 310 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 RASSF5Q8WWW0 418 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 GTPBP3Q969Y2 492 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 DHRS1Q96LJ7 313 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 EFCAB11Q9BUY7 163 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 BARHL1Q9BZE3 327 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 UCK2Q9BZX2 261 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 FAM83DQ9H4H8 585 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 TRPV5Q9NQA5 729 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 C14orf119Q9NWQ9 140 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 GULP1Q9UBP9 304 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 RPL36Q9Y3U8 105 aaKnown RBP12.66□□□□□ -0.38
VRK3-209ENST00000594948 SNX8Q9Y5X2 465 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 KCNE2Q9Y6J6 123 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 CCDC88CQ9P219 2028 aa12.66□□□□□ -0.38
VRK3-209ENST00000594948 SLC5A10A0PJK1 596 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 NPC1O15118 1278 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 SSX4O60224 188 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 CSO75390 466 aaKnown RBP12.65□□□□□ -0.38
VRK3-209ENST00000594948 IMPA1P29218 277 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 VIPR1P32241 457 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 CRYBB2P43320 205 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 SEMG2Q02383 582 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 RUNX1T1Q06455 604 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 OCLNQ16625 522 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 RAVER1Q8IY67 606 aaKnown RBP12.65□□□□□ -0.38
VRK3-209ENST00000594948 TAGAPQ8N103 731 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 CLDN22Q8N7P3 220 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 NANOGP1Q8N7R0 232 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 APOBEC4Q8WW27 367 aaKnown RBP12.65□□□□□ -0.38
VRK3-209ENST00000594948 KIAA1143Q96AT1 154 aaPredicted RBP12.65□□□□□ -0.38
VRK3-209ENST00000594948 MED8Q96G25 268 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 CNPPD1Q9BV87 410 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 VN1R3Q9BXE9 311 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 ARHGAP39Q9C0H5 1083 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 ROGDIQ9GZN7 287 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 SLA2Q9H6Q3 261 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 ITM2CQ9NQX7 267 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 REV1Q9UBZ9 1251 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 CMAHPQ9Y471 501 aa12.65□□□□□ -0.38
VRK3-209ENST00000594948 KRT87PA6NCN2 255 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 WASH3PC4AMC7 463 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 M0R129 80 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 ENTPD6O75354 484 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 RECKO95980 971 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 IL1AP01583 271 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 RB1P06400 928 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 IL7P13232 177 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 DDX5P17844 614 aaKnown RBP12.65□□□□□ -0.39
VRK3-209ENST00000594948 CHI3L1P36222 383 aaPredicted RBP12.65□□□□□ -0.39
VRK3-209ENST00000594948 EPHB3P54753 998 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 DSTNP60981 165 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 PRKCZQ05513 592 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 SCN1BQ07699 218 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 GPNMBQ14956 572 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 ZNF79Q15937 498 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 SYTL3Q4VX76 610 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 C6orf183Q5T699 404 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 KIAA1841Q6NSI8 718 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 REEP3Q6NUK4 255 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 COMMD6Q7Z4G1 85 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 NATD1Q8N6N6 113 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 GPR156Q8NFN8 814 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 OR4K1Q8NGD4 311 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 GPR151Q8TDV0 419 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 C16orf78Q8WTQ4 265 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 BTN2A2Q8WVV5 523 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 TMEM159Q96B96 161 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 PPP1R16AQ96I34 528 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 MSLNLQ96KJ4 702 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 PHOX2BQ99453 314 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 PKP4Q99569 1192 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 GDF15Q99988 308 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 WRAP53Q9BUR4 548 aaKnown RBP12.65□□□□□ -0.39
VRK3-209ENST00000594948 SLC22A4Q9H015 551 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 RMI1Q9H9A7 625 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 IL21Q9HBE4 155 aa12.65□□□□□ -0.39
VRK3-209ENST00000594948 DDX28Q9NUL7 540 aaKnown RBP12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms