RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 C16orf78Q8WTQ4 265 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 OR2B2Q9GZK3 357 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 LINC00597Q9H2U6 94 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 SPNS1Q9H2V7 528 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 HCFC1R1Q9NWW0 138 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 NPAP1Q9NZP6 1156 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 CFAP20Q9Y6A4 193 aaKnown RBP15.77■□□□□ 0.12
LIG1-206ENST00000594067 COL4A6Q14031 1691 aa15.77■□□□□ 0.12
LIG1-206ENST00000594067 PDE4DIPQ5VU43 2346 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 PDZK1P1A8MUH7 402 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 H3BM21 787 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 QSOX1O00391 747 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 CCL16O15467 120 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 IDH3BO43837 385 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 KIAA0513O60268 411 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 GPR37L1O60883 481 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 NPPBP16860 134 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 OR2B6P58173 313 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 PCDH1Q08174 1060 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.11
LIG1-206ENST00000594067 MMP21Q8N119 569 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 ZNF366Q8N895 744 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 PSD4Q8NDX1 1056 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 CXorf40BQ96DE9 158 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 OR5M11Q96RB7 305 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 THSD1Q9NS62 852 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 ERVK13-1Q9NX77 482 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 PCDH10Q9P2E7 1040 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 ITM2BQ9Y287 266 aa15.77■□□□□ 0.11
LIG1-206ENST00000594067 CXorf51AA0A1B0GTR3 108 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 LOC110117498-PIK3R3F6TDL0 507 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 C1orf105O95561 183 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 KLK1P06870 262 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 C8AP07357 584 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TYRP14679 529 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 ITGA2P17301 1181 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 PTX3P26022 381 aaPredicted RBP15.76■□□□□ 0.11
LIG1-206ENST00000594067 EEF1A2Q05639 463 aaKnown RBP15.76■□□□□ 0.11
LIG1-206ENST00000594067 RBBP4Q09028 425 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 LRRC74AQ0VAA2 488 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 DMC1Q14565 340 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 LRRC26Q2I0M4 334 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 NXNL2Q5VZ03 156 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 UBQLNLQ8IYU4 475 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 PIK3R3Q92569 461 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 AP2M1Q96CW1 435 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 PIP5K1AQ99755 562 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 DMRT3Q9NQL9 472 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 ZNF221Q9UK13 617 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 OGDHLQ9ULD0 1010 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 DYRK1BQ9Y463 629 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 FAM172BPA6NC97 362 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 FAM227AF5H4B4 570 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 H3BQ06 376 aaPredicted RBP15.76■□□□□ 0.11
LIG1-206ENST00000594067 KLHL18O94889 574 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 GADD45GO95257 159 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 POU1F1P28069 291 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 WEE1P30291 646 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 XCR1P46094 333 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 DEFB103AP81534 67 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TP53BP2Q13625 1128 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 MED22Q15528 200 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 BCL7AQ4VC05 210 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 ATAD3CQ5T2N8 411 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 ZNF544Q6NX49 715 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TRIM40Q6P9F5 258 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 C19orf48Q6RUI8 117 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TECPR1Q7Z6L1 1165 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 CFAP206Q8IYR0 622 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 OXR1Q8N573 874 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 AQP11Q8NBQ7 271 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 GEMIN6Q8WXD5 167 aaKnown RBP15.76■□□□□ 0.11
LIG1-206ENST00000594067 REPS1Q96D71 796 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 FAM83CQ9BQN1 747 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 SORBS1Q9BX66 1292 aaKnown RBP15.76■□□□□ 0.11
LIG1-206ENST00000594067 TMEM38AQ9H6F2 299 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 GULP1Q9UBP9 304 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TBC1D24Q9ULP9 559 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 HCN4Q9Y3Q4 1203 aa15.76■□□□□ 0.11
LIG1-206ENST00000594067 TRBC2A0A5B9 178 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 PIPSLA2A3N6 862 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 AP3D1O14617 1153 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 CCNB2O95067 398 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 SOX6P35712 828 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 SLC15A1P46059 708 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 OLR1P78380 273 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 GRIN2CQ14957 1233 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 EIF4HQ15056 248 aaKnown RBP15.75■□□□□ 0.11
LIG1-206ENST00000594067 ZNF740Q8NDX6 193 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 ZNF689Q96CS4 500 aaPredicted RBP15.75■□□□□ 0.11
LIG1-206ENST00000594067 TCEAL4Q96EI5 215 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 CRELD1Q96HD1 420 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 KCNS3Q9BQ31 491 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 WRAP53Q9BUR4 548 aaKnown RBP15.75■□□□□ 0.11
LIG1-206ENST00000594067 TAS2R9Q9NYW1 312 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 A0A1W2PRB8 838 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 HOXC11O43248 304 aaPredicted RBP15.75■□□□□ 0.11
LIG1-206ENST00000594067 GASTP01350 101 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 C1GALT1C1LP0DN25 315 aa15.75■□□□□ 0.11
LIG1-206ENST00000594067 CLPPQ16740 277 aaPredicted RBP15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms