RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 ATP6V1E2Q96A05 226 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 C1QTNF3Q9BXJ4 246 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 SLC26A1Q9H2B4 701 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 ANKHQ9HCJ1 492 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 POMPQ9Y244 141 aa18.59■□□□□ 0.57
LSM4-203ENST00000593829 FER1L5A0AVI2 2057 aa18.58■□□□□ 0.57
LSM4-203ENST00000593829 URADA6NGE7 173 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 DENRO43583 198 aaKnown RBP18.58■□□□□ 0.56
LSM4-203ENST00000593829 UGDHO60701 494 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 KLF7O75840 302 aaPredicted RBP18.58■□□□□ 0.56
LSM4-203ENST00000593829 NSA2O95478 260 aaKnown RBP18.58■□□□□ 0.56
LSM4-203ENST00000593829 PROCP04070 461 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 PRKAR1AP10644 381 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 HNF4AP41235 474 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 CHN2P52757 468 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 MTTPP55157 894 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 HERVK_113P63132 956 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 CDC20Q12834 499 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 ERV3-1Q14264 604 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 HERC3Q15034 1050 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 CFAP157Q5JU67 520 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 METTL21CQ5VZV1 264 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 GRHL2Q6ISB3 625 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 MED27Q6P2C8 311 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 MAVSQ7Z434 540 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 FBXW8Q8N3Y1 598 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 MARVELD2Q8N4S9 558 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 OR9A4Q8NGU2 314 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 SLC26A7Q8TE54 656 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 PYDC1Q8WXC3 89 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 SORT1Q99523 831 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 ERVK-6Q9BXR3 956 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 SLC6A16Q9GZN6 736 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 RHBGQ9H310 441 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 NOL11Q9H8H0 719 aaKnown RBP18.58■□□□□ 0.56
LSM4-203ENST00000593829 WDR54Q9H977 334 aa18.58■□□□□ 0.56
LSM4-203ENST00000593829 C6orf203Q9P0P8 240 aaPredicted RBP18.58■□□□□ 0.56
LSM4-203ENST00000593829 H0YIG0 161 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 CLEC3AO75596 197 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 SNRPNP63162 240 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 FAM69BQ5VUD6 431 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 ABHD13Q7L211 337 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 LAS2Q8IYD9 372 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 ALDH16A1Q8IZ83 802 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 STON2Q8WXE9 905 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 CCDC126Q96EE4 140 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 NSUN5Q96P11 429 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 ZNF282Q9UDV7 671 aaPredicted RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 PTRH2Q9Y3E5 179 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 H3BNX3 289 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 OR7A17O14581 309 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 CNOT3O75175 753 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 ALOX12P18054 663 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 IL1RNP18510 177 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 PRKAA2P54646 552 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 AQP4P55087 323 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 STXBP1P61764 594 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 SKP1P63208 163 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 OCA2Q04671 838 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 HYAL2Q12891 473 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 PDK3Q15120 406 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 NKG7Q16617 165 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 PRSS41Q7RTY9 318 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 AFAP1L2Q8N4X5 818 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 AMER3Q8N944 861 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 OR2Y1Q8NGV0 311 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 RDH11Q8TC12 318 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 ZBTB26Q9HCK0 441 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 CTSFQ9UBX1 484 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 NXT1Q9UKK6 140 aaKnown RBP18.57■□□□□ 0.56
LSM4-203ENST00000593829 LHX6Q9UPM6 363 aa18.57■□□□□ 0.56
LSM4-203ENST00000593829 ITPR1Q14643 2758 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 G3V2L1 256 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 CLDN9O95484 217 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 ZNF888P0CJ79 500 aaPredicted RBP18.56■□□□□ 0.56
LSM4-203ENST00000593829 IMPDH1P20839 514 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 PEX2P28328 305 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 ARL1P40616 181 aaPredicted RBP18.56■□□□□ 0.56
LSM4-203ENST00000593829 FOLR3P41439 243 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 ABCE1P61221 599 aaKnown RBP18.56■□□□□ 0.56
LSM4-203ENST00000593829 UGT8Q16880 541 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 MMEL1Q495T6 779 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 TOR1AIP1Q5JTV8 583 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 ZNF678Q5SXM1 525 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 NIPAL1Q6NVV3 410 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 ZYG11AQ6WRX3 759 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 L3MBTL4Q8NA19 623 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 OR52B6Q8NGF0 335 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 B4GALNT2Q8NHY0 566 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 CATSPER2Q96P56 530 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 NTMT1Q9BV86 223 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 YIPF2Q9BWQ6 316 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 PRM3Q9NNZ6 103 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 SEMA4BQ9NPR2 832 aaPredicted RBP18.56■□□□□ 0.56
LSM4-203ENST00000593829 TRPC4Q9UBN4 977 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 PRPF19Q9UMS4 504 aaKnown RBP18.56■□□□□ 0.56
LSM4-203ENST00000593829 NAALAD2Q9Y3Q0 740 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 MAP4K5Q9Y4K4 846 aa18.56■□□□□ 0.56
LSM4-203ENST00000593829 CDC14CA4D256 554 aa18.55■□□□□ 0.56
LSM4-203ENST00000593829 LRIT2A6NDA9 550 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms