RNA–Protein interactions for RNA: ENST00000593074.5

CLIP3-206, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLIP3, Length 2,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-206ENST00000593074 CRB2Q5IJ48 1285 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 USP30Q70CQ3 517 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 OR13F1Q8NGS4 319 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 ASB12Q8WXK4 309 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 RGMAQ96B86 450 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 C12orf43Q96C57 262 aaKnown RBP18.76■□□□□ 0.59
CLIP3-206ENST00000593074 ABHD8Q96I13 439 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 RIBC2Q9H4K1 309 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 SLAMF7Q9NQ25 335 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 PLXND1Q9Y4D7 1925 aa18.76■□□□□ 0.59
CLIP3-206ENST00000593074 CCDC159P0C7I6 412 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 AGXTP21549 392 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 GSTM2P28161 218 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 CLK3P49761 638 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 SFSWAPQ12872 951 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 UBE3DQ7Z6J8 389 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 OR5P2Q8WZ92 322 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 SGCDQ92629 289 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 MYOCQ99972 504 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 NLNQ9BYT8 704 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 XKR8Q9H6D3 395 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 MVB12BQ9H7P6 319 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 LIN28AQ9H9Z2 209 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 FANCEQ9HB96 536 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 TIMMDC1Q9NPL8 285 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 KIF17Q9P2E2 1029 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 CD207Q9UJ71 328 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 NAALAD2Q9Y3Q0 740 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 PLEKHM1Q9Y4G2 1056 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 PCDHGB3Q9Y5G1 929 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 E9PQ18 207 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 PDPK1O15530 556 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 LCMT2O60294 686 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 CLEC3AO75596 197 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 OPN1SWP03999 348 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 DDX5P17844 614 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 RRM2P31350 389 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 CDK5R2Q13319 367 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 UAP1L1Q3KQV9 507 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 IFI44LQ53G44 452 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 ZC3H7AQ8IWR0 971 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 SLC30A8Q8IWU4 369 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 SPARTQ8N0X7 666 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 SPPL2AQ8TCT8 520 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 CREB3L4Q8TEY5 395 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 LZICQ8WZA0 190 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 DDX31Q9H8H2 851 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 NEUROD4Q9HD90 331 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 THSD1Q9NS62 852 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 KRT84Q9NSB2 600 aa18.75■□□□□ 0.59
CLIP3-206ENST00000593074 NDRG4Q9ULP0 352 aaKnown RBP18.75■□□□□ 0.59
CLIP3-206ENST00000593074 HEATR5BQ9P2D3 2071 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 TRBC2A0A5B9 178 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 ADAMDEC1O15204 470 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 TMPRSS11DO60235 418 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 SEC14L2O76054 403 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 PCBP4P57723 403 aaKnown RBP18.74■□□□□ 0.59
CLIP3-206ENST00000593074 PPP2CBP62714 309 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 PPP2CAP67775 309 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 KRT33BQ14525 404 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 COL19A1Q14993 1142 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 SAXO2Q658L1 398 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 SLC44A3Q8N4M1 653 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 ATG16L2Q8NAA4 619 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 TTLQ8NG68 377 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 OR52E1Q8NGJ3 308 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 NEURL3Q96EH8 262 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 MRGPRX1Q96LB2 322 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 ABCG4Q9H172 646 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 TMEM9Q9P0T7 183 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 ANGPT4Q9Y264 503 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 LYVE1Q9Y5Y7 322 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 F5P12259 2224 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 SZT2Q5T011 3432 aa18.74■□□□□ 0.59
CLIP3-206ENST00000593074 TRIM64BA6NI03 449 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 OR52A4PA6NMU1 304 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 H3BMQ9 156 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 M0QX08 132 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 CYP4B1P13584 511 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 DSTNP60981 165 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 IL5RAQ01344 420 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 TUBA3CQ13748 450 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 SIM2Q14190 667 aaPredicted RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 GPR107Q5VW38 600 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 FAM180BQ6P0A1 224 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 TTC29Q8NA56 475 aaPredicted RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 CNIH3Q8TBE1 160 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 COG8Q96MW5 612 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 ZNF347Q96SE7 839 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 SH3GL3Q99963 347 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 RUBCNLQ9H714 662 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 EXD2Q9NVH0 621 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 A0A0A6YYD5 115 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 PRICKLE3O43900 615 aaPredicted RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 IFNA14P01570 189 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 ALDH9A1P49189 494 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 TRA2BP62995 288 aaKnown RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 GTF2IRD2BQ6EKJ0 949 aa18.73■□□□□ 0.59
CLIP3-206ENST00000593074 KIAA1324Q6UXG2 1013 aaKnown RBP18.73■□□□□ 0.59
CLIP3-206ENST00000593074 ADCK2Q7Z695 626 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms