RNA–Protein interactions for RNA: ENST00000592927.5

DDX39A-219, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-219ENST00000592927 ZSCAN1Q8NBB4 408 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 TTLQ8NG68 377 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 MTFMTQ96DP5 389 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF285Q96NJ3 590 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 NLNQ9BYT8 704 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ACPTQ9BZG2 426 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 BRINP2Q9C0B6 783 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 SLC7A5P2Q9GIP4 190 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 ADNPQ9H2P0 1102 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 RHBGQ9H310 441 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 LRTM1Q9HBL6 345 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 FARSBQ9NSD9 589 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 AIG1Q9NVV5 245 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 NOP53Q9NZM5 478 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 VPS29Q9UBQ0 182 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 EIF3LQ9Y262 564 aaKnown RBP11.29□□□□□ -0.6
DDX39A-219ENST00000592927 PCDHGA7Q9Y5G6 932 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 AP1M2Q9Y6Q5 423 aa11.29□□□□□ -0.6
DDX39A-219ENST00000592927 A1L4Q6 167 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 ZNF749O43361 778 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SEC22BO75396 215 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SNRNP200O75643 2136 aaKnown RBP11.28□□□□□ -0.6
DDX39A-219ENST00000592927 AGFG2O95081 481 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 TIAF1O95411 115 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 CBX6O95503 412 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SERPIND1P05546 499 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 CTSBP07858 339 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 PRPS2P11908 318 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 PCNAP12004 261 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 COX4I1P13073 169 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 WT1P19544 449 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-219ENST00000592927 GPX3P22352 226 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 AHRP35869 848 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 CYLC2Q14093 348 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-219ENST00000592927 MANEAQ5SRI9 462 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 VN1R4Q7Z5H5 301 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 ASPGQ86U10 573 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 VASH2Q86V25 355 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 CAMKVQ8NCB2 501 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 HUS1BQ8NHY5 278 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 TSPEARQ8WU66 669 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SLC13A3Q8WWT9 602 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 NDC1Q9BTX1 674 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 ULBP3Q9BZM4 244 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 C1orf21Q9H246 121 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SYNPO2LQ9H987 977 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 SDR39U1Q9NRG7 319 aaPredicted RBP11.28□□□□□ -0.6
DDX39A-219ENST00000592927 ZIM2Q9NZV7 527 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 FOXJ2Q9P0K8 574 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 G3BP2Q9UN86 482 aaKnown RBP11.28□□□□□ -0.6
DDX39A-219ENST00000592927 PCDHB3Q9Y5E6 796 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 GPR45Q9Y5Y3 372 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 LRBAP50851 2863 aa11.28□□□□□ -0.6
DDX39A-219ENST00000592927 DYTNA2CJ06 578 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 HYKKA2RU49 373 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 FITM1A5D6W6 292 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 ANKDD1BA6NHY2 528 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 H3BMH7 237 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 NDUFS4O43181 175 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 CPNE3O75131 537 aaKnown RBP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 STK17BO94768 372 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 STATHP02808 62 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 HBQ1P09105 142 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SLC35G6P0C7Q6 338 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 PTX3P26022 381 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 COL8A1P27658 744 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 CD82P27701 267 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 PTPN4P29074 926 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 NEK2P51955 445 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 ARSFP54793 590 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 NCALDP61601 193 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 RPL38P63173 70 aaKnown RBP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 RGS1Q08116 209 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 STX5Q13190 355 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 KCNAB2Q13303 367 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 PWP1Q13610 501 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 KIAA0040Q15053 153 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 HKDC1Q2TB90 917 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 PRTGQ2VWP7 1150 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 FAM214AQ32MH5 1076 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SPIN4Q56A73 249 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 PRAMEF17Q5VTA0 474 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 YOD1Q5VVQ6 348 aaPredicted RBP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 FAM219BQ5XKK7 198 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 ATCAYQ86WG3 371 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 TICAM1Q8IUC6 712 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.27□□□□□ -0.61
DDX39A-219ENST00000592927 ANKRD53Q8N9V6 530 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 TRPV3Q8NET8 790 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 MIB2Q96AX9 1013 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 CLIP3Q96DZ5 547 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 TM4SF19Q96DZ7 209 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 RNF31Q96EP0 1072 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 MARK4Q96L34 752 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 FCRL1Q96LA6 429 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 HBEGFQ99075 208 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SERPINI1Q99574 410 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 SLC25A23Q9BV35 468 aa11.27□□□□□ -0.61
DDX39A-219ENST00000592927 LRMDAQ9H2I8 198 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms