RNA–Protein interactions for RNA: ENST00000592012.5

MBD3-209, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 5

Gene MBD3, Length 2,379 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-209ENST00000592012 ARAFP10398 606 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 ALDH9A1P49189 494 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 PCBP3P57721 371 aaKnown RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 GRSF1Q12849 480 aaKnown RBP eCLIP18.77■□□□□ 0.63e-15■■■□□ 15.6
MBD3-209ENST00000592012 ADAM15Q13444 863 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 TBC1D3GQ6DHY5 549 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 TBC1D3CQ6IPX1 549 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 NUDT13Q86X67 352 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 TBC1D3Q8IZP1 549 aaPredicted RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 SETD9Q8NE22 299 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 CREB3L4Q8TEY5 395 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 ZNF566Q969W8 418 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 COG8Q96MW5 612 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 NLNQ9BYT8 704 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 TIMMDC1Q9NPL8 285 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 KRT84Q9NSB2 600 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 TMEM184CQ9NVA4 438 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 PAK1IP1Q9NWT1 392 aaPredicted RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 HSPE1-MOB4S4R3N1 261 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 CCDC88CQ9P219 2028 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 PRAMEF25A6NGN4 478 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 NDUFS4O43181 175 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 MATN1P21941 496 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 PKLRP30613 574 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 OR1E2P47887 323 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 MANFP55145 182 aaKnown RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 PIGFQ07326 219 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 UAP1L1Q3KQV9 507 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 IFI44LQ53G44 452 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 SDE2Q6IQ49 451 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 ADCK2Q7Z695 626 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 NATD1Q8N6N6 113 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 BPIFB6Q8NFQ5 453 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 OR2L8Q8NGY9 312 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 OR5P2Q8WZ92 322 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 LZICQ8WZA0 190 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 NAA50Q9GZZ1 169 aaKnown RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 DDX31Q9H8H2 851 aaKnown RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 C5AR2Q9P296 337 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 KIF17Q9P2E2 1029 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 HEMK1Q9Y5R4 338 aaPredicted RBP18.77■□□□□ 0.6
MBD3-209ENST00000592012 LYVE1Q9Y5Y7 322 aa18.77■□□□□ 0.6
MBD3-209ENST00000592012 SNRNP200O75643 2136 aaKnown RBP18.77■□□□□ 0.59
MBD3-209ENST00000592012 CLEC3AO75596 197 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 ATE1O95260 518 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 COL9A1P20849 921 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 PCBP4P57723 403 aaKnown RBP18.76■□□□□ 0.59
MBD3-209ENST00000592012 AMER3Q8N944 861 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 OR52E1Q8NGJ3 308 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 C1QTNF7Q9BXJ2 289 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 PRDM8Q9NQV8 689 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 ADAM29Q9UKF5 820 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.76■□□□□ 0.59
MBD3-209ENST00000592012 GMPPBQ9Y5P6 360 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 PRAMEF33A0A0G2JMD5 474 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 PTGES3LE9PB15 166 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 SLC31A1O15431 190 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 FRKP42685 505 aaPredicted RBP18.76■□□□□ 0.59
MBD3-209ENST00000592012 TUBA3CQ13748 450 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 KRT33BQ14525 404 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 RAB30Q15771 203 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 GTF2IRD2BQ6EKJ0 949 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 GTF2IRD2Q86UP8 949 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 FAM20CQ8IXL6 584 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 NEURL3Q96EH8 262 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 SCARF2Q96GP6 870 aaPredicted RBP18.76■□□□□ 0.59
MBD3-209ENST00000592012 ZNF347Q96SE7 839 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 AICDAQ9GZX7 198 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 LHPPQ9H008 270 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 TEX10Q9NXF1 929 aaPredicted RBP18.76■□□□□ 0.59
MBD3-209ENST00000592012 NAALAD2Q9Y3Q0 740 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 TESMINQ9Y4I5 508 aa18.76■□□□□ 0.59
MBD3-209ENST00000592012 LRIT2A6NDA9 550 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 TRIM64BA6NI03 449 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 PDZK1P1A8MUH7 402 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 E9PQ18 207 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 ADAMDEC1O15204 470 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 PPM1DO15297 605 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 PDPK1O15530 556 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 XPNPEP2O43895 674 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 PRICKLE3O43900 615 aaPredicted RBP18.75■□□□□ 0.59
MBD3-209ENST00000592012 ANGPTL1O95841 491 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 DSTNP60981 165 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 NPRL3Q12980 569 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 KIAA1614Q5VZ46 1190 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 SAXO2Q658L1 398 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 OR4C11Q6IEV9 310 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 TSPYL5Q86VY4 417 aaPredicted RBP18.75■□□□□ 0.59
MBD3-209ENST00000592012 TEFMQ96QE5 360 aaKnown RBP18.75■□□□□ 0.59
MBD3-209ENST00000592012 ZNF300Q96RE9 604 aaPredicted RBP18.75■□□□□ 0.59
MBD3-209ENST00000592012 RAB11FIP5Q9BXF6 653 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 MVB12BQ9H7P6 319 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 TNFRSF11BO00300 401 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 CACNB4O00305 520 aaPredicted RBP18.75■□□□□ 0.59
MBD3-209ENST00000592012 SCAMP1O15126 338 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 CDK4P11802 303 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 HOXB2P14652 356 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 PLA2G16P53816 162 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 CEACAM20Q6UY09 585 aa18.75■□□□□ 0.59
MBD3-209ENST00000592012 B3GNT8Q7Z7M8 397 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms