RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SEMA4BQ9NPR2 832 aaPredicted RBP8.63□□□□□ -1.03
DNMT1-223ENST00000591239 NECTIN3Q9NQS3 549 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 KCMF1Q9P0J7 381 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 LUZP4Q9P127 313 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 PTGFRNQ9P2B2 879 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 DCDC2Q9UHG0 476 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 DAPP1Q9UN19 280 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 MMACHCQ9Y4U1 282 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 CSAG2Q9Y5P2 127 aa8.63□□□□□ -1.03
DNMT1-223ENST00000591239 A0A1B0GTL3 188 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PPP6CO00743 305 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PLPP1O14494 284 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 CDH16O75309 829 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 SCELO95171 688 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 WISP1O95388 367 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 OTCP00480 354 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 UQCRHP07919 91 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TSPAN8P19075 237 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 ATP5F1P24539 256 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 SOX11P35716 441 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TSFMP43897 325 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 RAP1GDS1P52306 607 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 HNRNPFP52597 415 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 CDH13P55290 713 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 HSD17B7P56937 341 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 RPS13P62277 151 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TRAF3Q13114 568 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 SLC13A2Q13183 592 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 RCN2Q14257 317 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 ERCC6LQ2NKX8 1250 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF678Q5SXM1 525 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 FRG2Q64ET8 278 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 B3GNTL1Q67FW5 361 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TTC19Q6DKK2 380 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 OR4C11Q6IEV9 310 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 H3F3CQ6NXT2 135 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 EMBQ6PCB8 327 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 MILR1Q7Z6M3 343 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 SLC22A9Q8IVM8 553 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TMEM52Q8NDY8 209 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 OR4F6Q8NGB9 312 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 OR2W6PQ8NHA6 318 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 DNAJB14Q8TBM8 379 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 M1APQ8TC57 530 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 CPT1CQ8TCG5 803 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 ADAMTS18Q8TE60 1221 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PPP4R1Q8TF05 950 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 AENQ8WTP8 325 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 MTFMTQ96DP5 389 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 FRG2BQ96QU4 278 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 CSF3RQ99062 836 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 MAPKAP1Q9BPZ7 522 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 SORBS1Q9BX66 1292 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 ILKAPQ9H0C8 392 aaPredicted RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 MMP25Q9NPA2 562 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PRTFDC1Q9NRG1 225 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PSD3Q9NYI0 1048 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 PLAAQ9Y263 795 aa8.62□□□□□ -1.03
DNMT1-223ENST00000591239 MRPS33Q9Y291 106 aaKnown RBP8.62□□□□□ -1.03
DNMT1-223ENST00000591239 TLDC2A0PJX2 215 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 DYTNA2CJ06 578 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 A8MUA0 341 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 A8MUI8 341 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 TGFBR3LH3BV60 316 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CTNSO60931 367 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 GLRA3O75311 464 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 SUPT7LO94864 414 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 ETHE1O95571 254 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 NUDT17P0C025 328 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 KRT4P19013 534 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 IMPDH1P20839 514 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CRHR1P34998 444 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CCT5P48643 541 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 ARFIP1P53367 373 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 PRKAA2P54646 552 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 SLC26A5P58743 744 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 KCNC4Q03721 635 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CLCQ05315 142 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 ZNF33BQ06732 778 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 IFT88Q13099 833 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 SLAMF1Q13291 335 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CUL3Q13618 768 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 INPP5JQ15735 1006 aaPredicted RBP8.61□□□□□ -1.03
DNMT1-223ENST00000591239 GGTA1PQ4G0N0 100 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 UNC50Q53HI1 259 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 C10orf62Q5T681 223 aaPredicted RBP8.61□□□□□ -1.03
DNMT1-223ENST00000591239 ABHD17BQ5VST6 288 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 LETMD1Q6P1Q0 360 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CUZD1Q86UP6 607 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 SCUBE1Q8IWY4 988 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 IQCKQ8N0W5 287 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CATSPER1Q8NEC5 780 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 TRPC4APQ8TEL6 797 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 HAS2Q92819 552 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CAVIN3Q969G5 261 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 MIB2Q96AX9 1013 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 CNDP1Q96KN2 507 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 MAGEB10Q96LZ2 347 aaPredicted RBP8.61□□□□□ -1.03
DNMT1-223ENST00000591239 TMEM237Q96Q45 408 aa8.61□□□□□ -1.03
DNMT1-223ENST00000591239 PARD6BQ9BYG5 372 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms