RNA–Protein interactions for RNA: ENST00000590260.5

DDX39A-212, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 988 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-212ENST00000590260 OR4C11Q6IEV9 310 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 OR4F6Q8NGB9 312 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 DNAJB14Q8TBM8 379 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 ELP5Q8TE02 316 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 SNRNP40Q96DI7 357 aaKnown RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 MTFMTQ96DP5 389 aaKnown RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 LPAR4Q99677 370 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 BARD1Q99728 777 aaKnown RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 MMP25Q9NPA2 562 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 PRTFDC1Q9NRG1 225 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF223Q9UK11 482 aaPredicted RBP17.07■□□□□ 0.32
DDX39A-212ENST00000590260 MMACHCQ9Y4U1 282 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 PCDHGA11Q9Y5H2 935 aa17.07■□□□□ 0.32
DDX39A-212ENST00000590260 PSMD12O00232 456 aaPredicted RBP17.06■□□□□ 0.32
DDX39A-212ENST00000590260 EEDO75530 441 aaKnown RBP17.06■□□□□ 0.32
DDX39A-212ENST00000590260 WDPCPO95876 746 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 ICAM2P13598 275 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 UQCRFS1P47985 274 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 GPR143P51810 404 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 CCNG1P51959 295 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 HSD17B7P56937 341 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 RASA2Q15283 850 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 GGTA1PQ4G0N0 100 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF678Q5SXM1 525 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 IRAK1BP1Q5VVH5 260 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 WDR93Q6P2C0 686 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 CHSY3Q70JA7 882 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 CLNKQ7Z7G1 428 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 LCA5Q86VQ0 697 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 CRLF3Q8IUI8 442 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 CISD2Q8N5K1 135 aaKnown RBP17.06■□□□□ 0.32
DDX39A-212ENST00000590260 TM9SF4Q92544 642 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 HAS2Q92819 552 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 EPS8L2Q9H6S3 715 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 LYRM4Q9HD34 91 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 SLAMF7Q9NQ25 335 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 FARSBQ9NSD9 589 aaKnown RBP17.06■□□□□ 0.32
DDX39A-212ENST00000590260 ADGRE2Q9UHX3 823 aa17.06■□□□□ 0.32
DDX39A-212ENST00000590260 SAGE2PA6NJ88 616 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 SMIM23A6NLE4 172 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 PRKRAO75569 313 aaKnown RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 GSTA1P08263 222 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 SSR2P43308 183 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 HNRNPH2P55795 449 aaKnown RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 HERVK_113P63132 956 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ACTN3Q08043 901 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 EXT1Q16394 746 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ERCC6LQ2NKX8 1250 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 TCHHL1Q5QJ38 904 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 MRM1Q6IN84 353 aaKnown RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF595Q8IYB9 648 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 APCDD1LQ8NCL9 501 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 UCN3Q969E3 161 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ANKRD9Q96BM1 317 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ERVK-6Q9BXR3 956 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 COPS7BQ9H9Q2 264 aaPredicted RBP17.05■□□□□ 0.32
DDX39A-212ENST00000590260 ASF1BQ9NVP2 202 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 PSD3Q9NYI0 1048 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 FBXW2Q9UKT8 454 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 PPT2Q9UMR5 302 aa17.05■□□□□ 0.32
DDX39A-212ENST00000590260 MYO18BQ8IUG5 2567 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 A0A088AWK7 358 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 A0A0A6YYD5 115 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CLEC18AA5D8T8 446 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 WASHC1A8K0Z3 465 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 A8MUI8 341 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 FOXE1O00358 373 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 TMPRSS11DO60235 418 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 OR4F21O95013 312 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 PROCP04070 461 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 NUDT17P0C025 328 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF10P21506 573 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 HPDP32754 393 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 TNFSF10P50591 281 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 KCNC4Q03721 635 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 TGM3Q08188 693 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 SLAMF1Q13291 335 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CUL3Q13618 768 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ZNF169Q14929 603 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 AP5B1Q2VPB7 878 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ACER2Q5QJU3 275 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 FRG2Q64ET8 278 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CLEC18BQ6UXF7 455 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 BEST3Q8N1M1 668 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ZCCHC7Q8N3Z6 543 aaKnown RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CLEC18CQ8NCF0 446 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 SRFBP1Q8NEF9 429 aaKnown RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 TRPC4APQ8TEL6 797 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 RGMAQ96B86 450 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 L3HYPDHQ96EM0 354 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CNDP1Q96KN2 507 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 MAGEB10Q96LZ2 347 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 FRG2BQ96QU4 278 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 CCDC77Q9BR77 488 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 RNF32Q9H0A6 362 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ILKAPQ9H0C8 392 aaPredicted RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 KCNK13Q9HB14 408 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 PPIEQ9UNP9 301 aaKnown RBP17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ATG4BQ9Y4P1 393 aa17.04■□□□□ 0.32
DDX39A-212ENST00000590260 ASB4Q9Y574 426 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms