RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 ZNF700Q9H0M5 742 aa19.01■□□□□ 0.63
DDX39A-207ENST00000588542 LYRM4Q9HD34 91 aa19.01■□□□□ 0.63
DDX39A-207ENST00000588542 TIMM22Q9Y584 194 aa19.01■□□□□ 0.63
DDX39A-207ENST00000588542 PSMD12O00232 456 aaPredicted RBP19■□□□□ 0.63
DDX39A-207ENST00000588542 EEDO75530 441 aaKnown RBP19■□□□□ 0.63
DDX39A-207ENST00000588542 SEMA3DO95025 777 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 HPP00738 406 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 MYZAPP0CAP1 466 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 SOX8P57073 446 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 Q0VFX4 171 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 ABRAXAS2Q15018 415 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 NDUFAF7Q7L592 441 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 AMER2Q8N7J2 671 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 FAM47BQ8NA70 645 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 CLEC1AQ8NC01 280 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 METTL21AQ8WXB1 218 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 HBEGFQ99075 208 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 BRF2Q9HAW0 419 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 TMBIM4Q9HC24 238 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 ATP13A2Q9NQ11 1180 aa19■□□□□ 0.63
DDX39A-207ENST00000588542 IGKV3D-11A0A0A0MRZ8 115 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 A0A0A6YYD5 115 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 MKRN2OSH3BPM6 223 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 K7EM74 188 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 PRMT3O60678 531 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 KRT6AP02538 564 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 KRT6BP04259 564 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 BPGMP07738 259 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 MAOAP21397 527 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 HMOX2P30519 316 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 KRT6CP48668 564 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 ASPHQ12797 758 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 AIMP2Q13155 320 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 SLAMF1Q13291 335 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 NSDHLQ15738 373 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 MRM1Q6IN84 353 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 CPEB2Q7Z5Q1 589 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 ZCCHC7Q8N3Z6 543 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 FDCSPQ8NFU4 85 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 OR6Y1Q8NGX8 325 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 ADAMTS18Q8TE60 1221 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 VPS50Q96JG6 964 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 WDR77Q9BQA1 342 aaPredicted RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 MRPL1Q9BYD6 325 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 SHCBP1LQ9BZQ2 653 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 DDX31Q9H8H2 851 aaKnown RBP18.99■□□□□ 0.63
DDX39A-207ENST00000588542 ZNF160Q9HCG1 818 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 MLXIPLQ9NP71 852 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 NECTIN3Q9NQS3 549 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 PRDM9Q9NQV7 894 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 CLDN16Q9Y5I7 305 aa18.99■□□□□ 0.63
DDX39A-207ENST00000588542 COL6A6A6NMZ7 2263 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 NSG1A0A0A6YYJ2 146 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 IGHV3-20A0A0C4DH32 117 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 A6NL46 340 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 H3BQF6 201 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 TGFBR3LH3BV60 316 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 TM9SF1O15321 606 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 CHN1P15882 459 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 HNRNPH2P55795 449 aaKnown RBP18.98■□□□□ 0.63
DDX39A-207ENST00000588542 TBL3Q12788 808 aaKnown RBP18.98■□□□□ 0.63
DDX39A-207ENST00000588542 CSTF3Q12996 717 aaKnown RBP18.98■□□□□ 0.63
DDX39A-207ENST00000588542 ATG14Q6ZNE5 492 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 ZCCHC23Q6ZST2 131 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 SCUBE1Q8IWY4 988 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 ZNF595Q8IYB9 648 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 METTL4Q8N3J2 472 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 GALNT16Q8N428 558 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 TLCD1Q96CP7 247 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 CNDP1Q96KN2 507 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 IMMP1LQ96LU5 166 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 PTCHD1Q96NR3 888 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 TRMOQ9BU70 441 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 NUDT9Q9BW91 350 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 C19orf25Q9UFG5 118 aaPredicted RBP18.98■□□□□ 0.63
DDX39A-207ENST00000588542 FBXW2Q9UKT8 454 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 SLC12A4Q9UP95 1085 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 MMACHCQ9Y4U1 282 aa18.98■□□□□ 0.63
DDX39A-207ENST00000588542 PCDHGA9Q9Y5G4 932 aaKnown RBP18.98■□□□□ 0.63
DDX39A-207ENST00000588542 CPAMD8Q8IZJ3 1885 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 TCRBV16S1A1N1A0A5B0 115 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SERTM1A2A2V5 107 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 TMPRSS11DO60235 418 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 NPHS1O60500 1241 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 ULK1O75385 1050 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 PDGFAP04085 211 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 DHRS4L1P0CG22 281 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SFTPCP11686 197 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 HSD3B1P14060 373 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 NR1D1P20393 614 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 HSD3B2P26439 372 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SERPINB3P29508 390 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 ARRB2P32121 409 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SERPINB4P48594 390 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 GALNT1Q10472 559 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-207ENST00000588542 PARP9Q8IXQ6 854 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 C9orf43Q8TAL5 461 aaPredicted RBP18.97■□□□□ 0.63
DDX39A-207ENST00000588542 PKNOX2Q96KN3 472 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 SLC25A23Q9BV35 468 aa18.97■□□□□ 0.63
DDX39A-207ENST00000588542 ACPTQ9BZG2 426 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms