RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 PLAG1Q6DJT9 500 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 TTC19Q6DKK2 380 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-217ENST00000588230 RPS27LQ71UM5 84 aaKnown RBP18.03■□□□□ 0.48
CIRBP-217ENST00000588230 SIRT6Q8N6T7 355 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 ACOT4Q8N9L9 421 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 ZNF483Q8TF39 744 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-217ENST00000588230 PSMF1Q92530 271 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 LMF1Q96S06 567 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 WDR77Q9BQA1 342 aaPredicted RBP18.03■□□□□ 0.48
CIRBP-217ENST00000588230 C1QTNF3Q9BXJ4 246 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 ERVK-6Q9BXR3 956 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 PRTFDC1Q9NRG1 225 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 LUZP4Q9P127 313 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 DAPP1Q9UN19 280 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 B3GNT3Q9Y2A9 372 aa18.03■□□□□ 0.48
CIRBP-217ENST00000588230 SUPT7LO94864 414 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 TSPAN8P19075 237 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 HIST1H1TP22492 207 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-217ENST00000588230 CCT5P48643 541 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 HSD17B7P56937 341 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 SRSF1Q07955 248 aaKnown RBP eCLIP18.02■□□□□ 0.481e-12■□□□□ 8.7
CIRBP-217ENST00000588230 IFFO1Q0D2I5 559 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 SLC13A2Q13183 592 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 OR4C11Q6IEV9 310 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 IGFL2Q6UWQ7 119 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 ZNF793Q6ZN11 406 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 SLC22A9Q8IVM8 553 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 ZNF595Q8IYB9 648 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 AMER2Q8N7J2 671 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 FAM47BQ8NA70 645 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 OR2W6PQ8NHA6 318 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 WDR20Q8TBZ3 569 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 MTFMTQ96DP5 389 aaKnown RBP18.02■□□□□ 0.48
CIRBP-217ENST00000588230 MAGEB10Q96LZ2 347 aaPredicted RBP18.02■□□□□ 0.48
CIRBP-217ENST00000588230 PARD6BQ9BYG5 372 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 LYRM4Q9HD34 91 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 NECTIN3Q9NQS3 549 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 SPACA6W5XKT8 324 aa18.02■□□□□ 0.48
CIRBP-217ENST00000588230 DOPEY2Q9Y3R5 2298 aa18.02■□□□□ 0.47
CIRBP-217ENST00000588230 IGKV3D-11A0A0A0MRZ8 115 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 A8MUI8 341 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 FOXE1O00358 373 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-217ENST00000588230 NUDT17P0C025 328 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 IMPDH1P20839 514 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 CLCQ05315 142 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 IFT88Q13099 833 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 PLEKHN1Q494U1 663 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-217ENST00000588230 C10orf62Q5T681 223 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-217ENST00000588230 FRG2Q64ET8 278 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 SH2D5Q6ZV89 423 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 OR4F6Q8NGB9 312 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 DNAJB14Q8TBM8 379 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 M1APQ8TC57 530 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 CPT1CQ8TCG5 803 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 TRPC4APQ8TEL6 797 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 CAVIN3Q969G5 261 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 FRG2BQ96QU4 278 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 MAPKAP1Q9BPZ7 522 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 ILKAPQ9H0C8 392 aaPredicted RBP18.01■□□□□ 0.47
CIRBP-217ENST00000588230 KCNK13Q9HB14 408 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 PSD3Q9NYI0 1048 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 TEKT2Q9UIF3 430 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 GRID1Q9ULK0 1009 aa18.01■□□□□ 0.47
CIRBP-217ENST00000588230 TCRBV16S1A1N1A0A5B0 115 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 A8MUA0 341 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 CYR61O00622 381 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 PPP6CO00743 305 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 COPEO14579 308 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SCELO95171 688 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 KRT4P19013 534 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 CRHR1P34998 444 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SOX11P35716 441 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 TSFMP43897 325 aaKnown RBP18■□□□□ 0.47
CIRBP-217ENST00000588230 HNRNPFP52597 415 aaKnown RBP18■□□□□ 0.47
CIRBP-217ENST00000588230 ARFIP1P53367 373 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 PRKAA2P54646 552 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 CUL3Q13618 768 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 GGTA1PQ4G0N0 100 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 UNC50Q53HI1 259 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SGO1Q5FBB7 561 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 ZNF678Q5SXM1 525 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 ABHD17BQ5VST6 288 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 B3GNTL1Q67FW5 361 aaPredicted RBP18■□□□□ 0.47
CIRBP-217ENST00000588230 Q6ZS92 163 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SCUBE1Q8IWY4 988 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 RIBC1Q8N443 379 aaPredicted RBP18■□□□□ 0.47
CIRBP-217ENST00000588230 CCDC126Q96EE4 140 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 CNDP1Q96KN2 507 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 TMEM237Q96Q45 408 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 CSF3RQ99062 836 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SERPINI1Q99574 410 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 SORBS1Q9BX66 1292 aaKnown RBP18■□□□□ 0.47
CIRBP-217ENST00000588230 ELOVL6Q9H5J4 265 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 KCMF1Q9P0J7 381 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 FBXW2Q9UKT8 454 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 EMCNQ9ULC0 261 aa18■□□□□ 0.47
CIRBP-217ENST00000588230 USP9YO00507 2555 aaPredicted RBP17.99■□□□□ 0.47
CIRBP-217ENST00000588230 DYTNA2CJ06 578 aa17.99■□□□□ 0.47
CIRBP-217ENST00000588230 PLPP1O14494 284 aa17.99■□□□□ 0.47
CIRBP-217ENST00000588230 CTNSO60931 367 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms