RNA–Protein interactions for RNA: ENST00000588071.5

CCDC130-208, Transcript of coiled-coil domain containing 130, human

TSL 5

Gene CCDC130, Length 1,157 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC130-208	ENST00000588071	HCN3	Q9P1Z3	774 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	PHF11	Q9UIL8	331 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	DAPP1	Q9UN19	280 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	WBP11	Q9Y2W2	641 aa	Known RBP	13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	ASB4	Q9Y574	426 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	GPR45	Q9Y5Y3	372 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	AK5	Q9Y6K8	562 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	CEP250	Q9BV73	2442 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	FER1L5	A0AVI2	2057 aa		13.36	□□□□□ -0.27
CCDC130-208	ENST00000588071	PSMD12	O00232	456 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MEN1	O00255	615 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	NVL	O15381	856 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	PROM1	O43490	865 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	LRAT	O95237	230 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	RNH1	P13489	461 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	TACR1	P25103	407 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	SLC5A2	P31639	672 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	BUD31	P41223	144 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	HNRNPH2	P55795	449 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	RAB38	P57729	211 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MAT1A	Q00266	395 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	SQLE	Q14534	574 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	PTGR1	Q14914	329 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	HEPACAM	Q14CZ8	416 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	NKAIN1	Q4KMZ8	207 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MRM1	Q6IN84	353 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	C6orf15	Q6UXA7	325 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	RIPOR1	Q6ZS17	1223 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MIER2	Q8N344	545 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MR1	Q95460	341 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	GFM2	Q969S9	779 aa	Known RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	PEX11G	Q96HA9	241 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	LRFN5	Q96NI6	719 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	DPH2	Q9BQC3	489 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	NRSN2	Q9GZP1	204 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	WDR41	Q9HAD4	459 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	KCMF1	Q9P0J7	381 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	TRPC4	Q9UBN4	977 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	GPN3	Q9UHW5	284 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	MAPRE3	Q9UPY8	281 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	ATG4B	Q9Y4P1	393 aa		13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071	TMEM184B	Q9Y519	407 aa	Predicted RBP	13.35	□□□□□ -0.27
CCDC130-208	ENST00000588071		A0A1W2PR48	441 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	AKAP10	O43572	662 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	SLC22A3	O75751	556 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	DCTN3	O75935	186 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	IL3	P08700	152 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	RORA	P35398	523 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	ALDH9A1	P49189	494 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	ATP4B	P51164	291 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	CLDN8	P56748	225 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	IRX1	P78414	480 aa	Predicted RBP	13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	DSG2	Q14126	1118 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	SYT16	Q17RD7	645 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	PDCD4	Q53EL6	469 aa	Known RBP	13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	NDUFAF5	Q5TEU4	345 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	MLIP	Q5VWP3	458 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	MTDH	Q86UE4	582 aa	Known RBP	13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	ADAMTS18	Q8TE60	1221 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	EGLN2	Q96KS0	407 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	ZBTB18	Q99592	522 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	BRINP2	Q9C0B6	783 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	MYNN	Q9NPC7	610 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	MRGBP	Q9NV56	204 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	FOXJ2	Q9P0K8	574 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	IFT80	Q9P2H3	777 aa	Predicted RBP	13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	PADI1	Q9ULC6	663 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	MAP4K5	Q9Y4K4	846 aa		13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	COPG1	Q9Y678	874 aa	Known RBP	13.34	□□□□□ -0.27
CCDC130-208	ENST00000588071	SDK2	Q58EX2	2172 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	TEX51	A0A1B0GUA7	166 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	C1orf226	A1L170	272 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	FAM227A	F5H4B4	570 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	FCHO1	O14526	889 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	DRD2	P14416	443 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	ITGAX	P20702	1163 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	PRPS1L1	P21108	318 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	IL10	P22301	178 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	HPCAL1	P37235	193 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	RPL3	P39023	403 aa	Known RBP	13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	XCR1	P46094	333 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	UFM1	P61960	85 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	SHC2	P98077	582 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	MC1R	Q01726	317 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	TNFRSF17	Q02223	184 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	OCA2	Q04671	838 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	KLC1	Q07866	573 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	ERV3-1	Q14264	604 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	MFSD4B	Q5TF39	518 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	C18orf63	Q68DL7	685 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	FAM71E1	Q6IPT2	247 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	PAOX	Q6QHF9	649 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	IKBIP	Q70UQ0	350 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	R3HCC1L	Q7Z5L2	792 aa	Known RBP	13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	CPSF7	Q8N684	471 aa	Known RBP	13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	FAM47B	Q8NA70	645 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	TBC1D20	Q96BZ9	403 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	LRRC37B	Q96QE4	947 aa		13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	PRPF18	Q99633	342 aa	Known RBP	13.33	□□□□□ -0.28
CCDC130-208	ENST00000588071	RPF2	Q9H7B2	306 aa	Known RBP	13.33	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms