RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 A8MUA0 341 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 CDH16O75309 829 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SUPT7LO94864 414 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SCELO95171 688 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TSPAN8P19075 237 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 ATP5F1P24539 256 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-207ENST00000587256 NEK2P51955 445 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 HNRNPFP52597 415 aaKnown RBP13.9□□□□□ -0.18
ATG4D-207ENST00000587256 CDH13P55290 713 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SLC26A5P58743 744 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TAS2R50P59544 299 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 HERVK_113P63132 956 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 IFFO1Q0D2I5 559 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 IFT88Q13099 833 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TLR1Q15399 786 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 PLEKHN1Q494U1 663 aaPredicted RBP13.9□□□□□ -0.18
ATG4D-207ENST00000587256 DEPDC1Q5TB30 811 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 EMBQ6PCB8 327 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 MILR1Q7Z6M3 343 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TDRPQ86YL5 185 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SCUBE1Q8IWY4 988 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 ZNF595Q8IYB9 648 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TMEM151AQ8N4L1 468 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 TMEM52Q8NDY8 209 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 WDR20Q8TBZ3 569 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 M1APQ8TC57 530 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 MIB2Q96AX9 1013 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 LMF1Q96S06 567 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 MAPKAP1Q9BPZ7 522 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 NTMT1Q9BV86 223 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SORBS1Q9BX66 1292 aaKnown RBP13.9□□□□□ -0.18
ATG4D-207ENST00000587256 C1QTNF3Q9BXJ4 246 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 ERVK-6Q9BXR3 956 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 ELOVL6Q9H5J4 265 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 ZBTB26Q9HCK0 441 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 LYRM4Q9HD34 91 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 MMP25Q9NPA2 562 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 DCDC2Q9UHG0 476 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 FBXW2Q9UKT8 454 aa13.9□□□□□ -0.18
ATG4D-207ENST00000587256 SAGE2PA6NJ88 616 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 FOXO6A8MYZ6 492 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 PLPP1O14494 284 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 DLX3O60479 287 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 F10P00742 488 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 CPN2P22792 545 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 PTX3P26022 381 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 TSFMP43897 325 aaKnown RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 KCNC4Q03721 635 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 ZNF169Q14929 603 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 INPP5JQ15735 1006 aaPredicted RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 GGTA1PQ4G0N0 100 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 FRG2Q64ET8 278 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 FCRLBQ6BAA4 426 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 OR4C11Q6IEV9 310 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 WDR93Q6P2C0 686 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 CUZD1Q86UP6 607 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 NUDT13Q86X67 352 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 SLC22A9Q8IVM8 553 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 OR4F6Q8NGB9 312 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 OR2W6PQ8NHA6 318 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 TRPC4APQ8TEL6 797 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 AENQ8WTP8 325 aaKnown RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 MTFMTQ96DP5 389 aaKnown RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 TMEM237Q96Q45 408 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 FRG2BQ96QU4 278 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 SERPINI1Q99574 410 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 CLMPQ9H6B4 373 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 PNO1Q9NRX1 252 aaKnown RBP13.89□□□□□ -0.19
ATG4D-207ENST00000587256 PLA2G3Q9NZ20 509 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 ABI3Q9P2A4 366 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 PCDHGA10Q9Y5H3 936 aa13.89□□□□□ -0.19
ATG4D-207ENST00000587256 TENM4Q6N022 2769 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 SPENQ96T58 3664 aaKnown RBP13.88□□□□□ -0.19
ATG4D-207ENST00000587256 TLDC2A0PJX2 215 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 SYNDIG1LA6NDD5 238 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 FOXE1O00358 373 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-207ENST00000587256 CYR61O00622 381 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 COPEO14579 308 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 VPS4BO75351 444 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 MYO1DO94832 1006 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 ETHE1O95571 254 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 IFNA16P05015 189 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 NUDT17P0C025 328 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 MYL2P10916 166 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 CLCQ05315 142 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 STX4Q12846 297 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 CUL3Q13618 768 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 RASA2Q15283 850 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 SGO1Q5FBB7 561 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 ZNF678Q5SXM1 525 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 C10orf62Q5T681 223 aaPredicted RBP13.88□□□□□ -0.19
ATG4D-207ENST00000587256 LETMD1Q6P1Q0 360 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 SLC5A8Q8N695 610 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 CCDC63Q8NA47 563 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 ZNF354BQ96LW1 612 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.88□□□□□ -0.19
ATG4D-207ENST00000587256 TRPS1Q9UHF7 1281 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 PHF11Q9UIL8 331 aa13.88□□□□□ -0.19
ATG4D-207ENST00000587256 VPS4AQ9UN37 437 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms