RNA–Protein interactions for RNA: ENST00000587170.1

CXXC1-208, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-208ENST00000587170 CSPG4Q6UVK1 2322 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 SBSNQ6UWP8 590 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 PAMR1Q6UXH9 720 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 C16orf47Q6ZP98 133 aaPredicted RBP13.09□□□□□ -0.31
CXXC1-208ENST00000587170 RTL4Q6ZR62 310 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 CAMKMTQ7Z624 323 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 GALNT7Q86SF2 657 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 CNTN4Q8IWV2 1026 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 GPATCH11Q8N954 259 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 OR10Q1Q8NGQ4 319 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 SIGLEC10Q96LC7 697 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 TSNARE1Q96NA8 513 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 IL1RL2Q9HB29 575 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 EDARQ9UNE0 448 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 PCDHGB3Q9Y5G1 929 aa13.09□□□□□ -0.31
CXXC1-208ENST00000587170 ATRQ13535 2644 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 A0A1B0GTL3 188 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 A6NNC1 897 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 ENDOUP21128 410 aaKnown RBP13.08□□□□□ -0.32
CXXC1-208ENST00000587170 HNF4AP41235 474 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 KIR2DL3P43628 341 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 VPS41P49754 854 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 HK2P52789 917 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 RAB38P57729 211 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 TRIP13Q15645 432 aaPredicted RBP13.08□□□□□ -0.32
CXXC1-208ENST00000587170 FLYWCH1Q4VC44 716 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 TOR1AIP1Q5JTV8 583 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 HECTD2Q5U5R9 776 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF585AQ6P3V2 769 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 IL20RBQ6UXL0 311 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 CDC20BQ86Y33 519 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF595Q8IYB9 648 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 TMEM52Q8NDY8 209 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 OR8K3Q8NH51 312 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 SCYL1Q96KG9 808 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 SGCZQ96LD1 299 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 SH3GL2Q99962 352 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 AIF1LQ9BQI0 150 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 RHBGQ9H310 441 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 PRTFDC1Q9NRG1 225 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 PNO1Q9NRX1 252 aaKnown RBP13.08□□□□□ -0.32
CXXC1-208ENST00000587170 CRIM1Q9NZV1 1036 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
CXXC1-208ENST00000587170 RTTNQ86VV8 2226 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 SYT5O00445 386 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 HCN1O60741 890 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 CELA3AP09093 270 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 CCDC175P0C221 793 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 GABRA1P14867 456 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 CNR1P21554 472 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 GSTM2P28161 218 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 HNRNPH1P31943 449 aaKnown RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 IL2P60568 153 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 STXBP1P61764 594 aaKnown RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 RUNX2Q13950 521 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 CRYMQ14894 314 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 ADPRMQ3LIE5 342 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 TTC27Q6P3X3 843 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 NXPE4Q6UWF7 544 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 HSDL2Q6YN16 418 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 TMPRSS11BQ86T26 416 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 BIVMQ86UB2 503 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 TMEM132CQ8N3T6 1108 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 RELL2Q8NC24 303 aaPredicted RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 MORN4Q8NDC4 146 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 SARAFQ96BY9 339 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 PDLIM5Q96HC4 596 aaKnown RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 QRFPRQ96P65 431 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 TRIM54Q9BYV2 358 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 IARS2Q9NSE4 1012 aaKnown RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 CBLCQ9ULV8 474 aa13.07□□□□□ -0.32
CXXC1-208ENST00000587170 RAI1Q7Z5J4 1906 aaPredicted RBP13.07□□□□□ -0.32
CXXC1-208ENST00000587170 STAB1Q9NY15 2570 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 G3V3Y1 287 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 WWP2O00308 870 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 CYR61O00622 381 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 CLDN4O14493 209 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 ZNF354AO60765 605 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 ATE1O95260 518 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 TBX6O95947 436 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 KRT14P02533 472 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 MAN2A2P49641 1150 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 TERF1P54274 439 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 CCZ1BP86790 482 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 CCZ1P86791 482 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 SLC13A2Q13183 592 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 DAZAP2Q15038 168 aaPredicted RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 WLSQ5T9L3 541 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 ADGRD1Q6QNK2 874 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 THOC6Q86W42 341 aaKnown RBP13.06□□□□□ -0.32
CXXC1-208ENST00000587170 NAT8LQ8N9F0 302 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 OR14A16Q8NHC5 309 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 FAM222BQ8WU58 562 aa13.06□□□□□ -0.32
CXXC1-208ENST00000587170 PTPMT1Q8WUK0 201 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms