RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 PCTPQ9UKL6 214 aa17.6■□□□□ 0.41
ATG4D-203ENST00000585752 HECTD1Q9ULT8 2610 aa17.6■□□□□ 0.41
ATG4D-203ENST00000585752 A0A088AWK7 358 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 A1L4Q6 167 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 OR5H15A6NDH6 313 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 MAGEB17A8MXT2 336 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CTIFO43310 598 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CHST10O43529 356 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 DLX3O60479 287 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 UGDHO60701 494 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 B4GALT2O60909 372 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 SUPT7LO94864 414 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 RASAL1O95294 804 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CRYABP02511 175 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 ZNF10P21506 573 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 SERPINB1P30740 379 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CASP2P42575 452 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 RAB8AP61006 207 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 OLR1P78380 273 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 ASPHQ12797 758 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 MEP1AQ16819 746 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 TOR1AIP1Q5JTV8 583 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CFAP157Q5JU67 520 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 TTC19Q6DKK2 380 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 GRHL2Q6ISB3 625 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 PAPD4Q6PIY7 484 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 ZYG11AQ6WRX3 759 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 ANKRD53Q8N9V6 530 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 WDR34Q96EX3 536 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 PTCHD1Q96NR3 888 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 BARD1Q99728 777 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 RNF32Q9H0A6 362 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 RHBGQ9H310 441 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 CLK4Q9HAZ1 481 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 SEMA4BQ9NPR2 832 aaPredicted RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 MKS1Q9NXB0 559 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 OSGIN2Q9Y236 505 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 STK38LQ9Y2H1 464 aa17.59■□□□□ 0.41
ATG4D-203ENST00000585752 SPENQ96T58 3664 aaKnown RBP17.59■□□□□ 0.41
ATG4D-203ENST00000585752 OR2W5A6NFC9 320 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PLIN3O60664 434 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PRMT3O60678 531 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PRAMEF2O60811 474 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SPAG7O75391 227 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 CLDN9O95484 217 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 OTCP00480 354 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PROCP04070 461 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SERPINA6P08185 405 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 RPS17P08708 135 aaKnown RBP17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SBK3P0C264 359 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 CPA3P15088 417 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 EPORP19235 508 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 TGM3Q08188 693 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SH2D5Q6ZV89 423 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 AFAP1L2Q8N4X5 818 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SLC5A8Q8N695 610 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 HORMAD2Q8N7B1 307 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 CCNYL1Q8N7R7 359 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 BANPQ8N9N5 519 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 UTP15Q8TED0 518 aaKnown RBP17.58■□□□□ 0.4
ATG4D-203ENST00000585752 CENPKQ9BS16 269 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 ADGRE2Q9UHX3 823 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 ERRFI1Q9UJM3 462 aaPredicted RBP17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PCDHGA11Q9Y5H2 935 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 PTPN13Q12923 2485 aa17.58■□□□□ 0.4
ATG4D-203ENST00000585752 SVILO95425 2214 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 CLEC3AO75596 197 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 RNH1P13489 461 aaKnown RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 IMPDH1P20839 514 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 PRKAA2P54646 552 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 NAA20P61599 178 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 SNRPNP63162 240 aaKnown RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 RHAGQ02094 409 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 DDX39BQ13838 428 aaKnown RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 CPSF6Q16630 551 aaKnown RBP eCLIP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 ACER2Q5QJU3 275 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 ZNF678Q5SXM1 525 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 MILR1Q7Z6M3 343 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 TMEM151AQ8N4L1 468 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 DNAJB8Q8NHS0 232 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 ZNF483Q8TF39 744 aaPredicted RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 ZBTB9Q96C00 473 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 NSUN5Q96P11 429 aaKnown RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 TMEM237Q96Q45 408 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 UTP23Q9BRU9 249 aaKnown RBP17.57■□□□□ 0.4
ATG4D-203ENST00000585752 MMP25Q9NPA2 562 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 EMCNQ9ULC0 261 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 PLLPQ9Y342 182 aa17.57■□□□□ 0.4
ATG4D-203ENST00000585752 RELNP78509 3460 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 CYSRT1A8MQ03 144 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 MLYCDO95822 493 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 BTN3A2P78410 334 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 CLCQ05315 142 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 RBPJQ06330 500 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 PCDH1Q08174 1060 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 IFT88Q13099 833 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 CASP8Q14790 479 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 ZNF766Q5HY98 468 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 FCRLBQ6BAA4 426 aa17.56■□□□□ 0.4
ATG4D-203ENST00000585752 TRIM40Q6P9F5 258 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms