RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 RNF11Q9Y3C5 154 aa13□□□□□ -0.33
PRKCSH-202ENST00000585540 CHD6Q8TD26 2715 aa13□□□□□ -0.33
PRKCSH-202ENST00000585540 ITPR1Q14643 2758 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 LOC400499M0QZD8 3231 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 IGKV3D-11A0A0A0MRZ8 115 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 TCRBV16S1A1N1A0A5B0 115 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 C4orf51C9J302 202 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 DNAJB5O75953 348 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 CPA3P15088 417 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 CERS1P27544 350 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 HMOX2P30519 316 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 GSTM5P46439 218 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 RPS13P62277 151 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 GALNT1Q10472 559 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 NFATC3Q12968 1075 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 CHAF1BQ13112 559 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 CFAP157Q5JU67 520 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 IGFL2Q6UWQ7 119 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 FRMD7Q6ZUT3 714 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 ANKRD37Q7Z713 158 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 EXOC3L1Q86VI1 746 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 ACOT4Q8N9L9 421 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 TEX19Q8NA77 164 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 M1APQ8TC57 530 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SELENOMQ8WWX9 145 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 PGM2Q96G03 612 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 METTL2AQ96IZ6 378 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 IMMP1LQ96LU5 166 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 PTCHD1Q96NR3 888 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 FAM111AQ96PZ2 611 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 F2RL3Q96RI0 385 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 LMF1Q96S06 567 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 PELOQ9BRX2 385 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SHCBP1LQ9BZQ2 653 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SEMA4CQ9C0C4 833 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 RNF32Q9H0A6 362 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF552Q9H707 407 aaPredicted RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 DDX31Q9H8H2 851 aaKnown RBP12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 WDR41Q9HAD4 459 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 ZNF160Q9HCG1 818 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SLC17A7Q9P2U7 560 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 SCN3AQ9NY46 2000 aa12.99□□□□□ -0.33
PRKCSH-202ENST00000585540 MED13Q9UHV7 2174 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 MGAQ8IWI9 3026 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 SPTA1P02549 2419 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 SAGE2PA6NJ88 616 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 PLPP1O14494 284 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 FFAR3O14843 346 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 GPR42O15529 346 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TYROBPO43914 113 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TRIM13O60858 407 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 CTNSO60931 367 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 JRKO75564 520 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 SNUPNO95149 360 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ATXN8OSP0DMR3 200 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 CDH13P55290 713 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 OR4D2P58180 307 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TAS2R50P59544 299 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 SNRPNP63162 240 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 EEF1A2Q05639 463 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ACTN3Q08043 901 aaPredicted RBP12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 RUNX2Q13950 521 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 FAM219BQ5XKK7 198 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ADNP2Q6IQ32 1131 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 LETMD1Q6P1Q0 360 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 PAPD4Q6PIY7 484 aaKnown RBP12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 CYP20A1Q6UW02 462 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ISLR2Q6UXK2 745 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ATG14Q6ZNE5 492 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 RNF165Q6ZSG1 346 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 KIRREL3Q8IZU9 778 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ZADH2Q8N4Q0 377 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TCP10LQ8TDR4 215 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TRPC4APQ8TEL6 797 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 CDK15Q96Q40 435 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 NUDT9Q9BW91 350 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 GSTO2Q9H4Y5 243 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 TMBIM4Q9HC24 238 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 MMP25Q9NPA2 562 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 ABI3Q9P2A4 366 aa12.98□□□□□ -0.33
PRKCSH-202ENST00000585540 PCSK5Q92824 1860 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 A0A0A6YYD5 115 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 ARHGAP10A1A4S6 786 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 CYR61O00622 381 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 TM9SF1O15321 606 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 DYRK3O43781 588 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 B4GALT2O60909 372 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 ULK1O75385 1050 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 C1QL1O75973 258 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 OR4F21O95013 312 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 PRR35P0CG20 571 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 TSPAN8P19075 237 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 CPN2P22792 545 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 TRA2BP62995 288 aaKnown RBP12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 OLR1P78380 273 aa12.97□□□□□ -0.33
PRKCSH-202ENST00000585540 TNFRSF17Q02223 184 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms