RNA–Protein interactions for RNA: ENST00000584083.5

SS18-224, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 663 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-224ENST00000584083 OR51B5Q9H339 312 aa19.13■□□□□ 0.65
SS18-224ENST00000584083 PNO1Q9NRX1 252 aaKnown RBP19.13■□□□□ 0.65
SS18-224ENST00000584083 ANKUB1A6NFN9 424 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 E2F3O00716 465 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 UGDHO60701 494 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 PRAMEF2O60811 474 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 MYO1DO94832 1006 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 AGFG2O95081 481 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 ATP5A1P25705 553 aaKnown RBP19.12■□□□□ 0.65
SS18-224ENST00000584083 PIK3CBP42338 1070 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 SSR2P43308 183 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 ST13P50502 369 aaKnown RBP19.12■□□□□ 0.65
SS18-224ENST00000584083 RAP1GDS1P52306 607 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 PHEXP78562 749 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 CPSF6Q16630 551 aaKnown RBP eCLIP19.12■□□□□ 0.65
SS18-224ENST00000584083 DEPDC1Q5TB30 811 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 CLNKQ7Z7G1 428 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 SCUBE1Q8IWY4 988 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 GSPT2Q8IYD1 628 aaKnown RBP19.12■□□□□ 0.65
SS18-224ENST00000584083 ACOT4Q8N9L9 421 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 ELP5Q8TE02 316 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 FAR1Q8WVX9 515 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 RGMAQ96B86 450 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 REPS1Q96D71 796 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 MTBPQ96DY7 904 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 CSF3RQ99062 836 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 MRPL57Q9BQC6 102 aaKnown RBP19.12■□□□□ 0.65
SS18-224ENST00000584083 CENPKQ9BS16 269 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 CDCP1Q9H5V8 836 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 NOL11Q9H8H0 719 aaKnown RBP19.12■□□□□ 0.65
SS18-224ENST00000584083 LYRM4Q9HD34 91 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 DMRT3Q9NQL9 472 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 RNF11Q9Y3C5 154 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 SPACA6W5XKT8 324 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 ZGRF1Q86YA3 2104 aa19.12■□□□□ 0.65
SS18-224ENST00000584083 SETXQ7Z333 2677 aaKnown RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 STX16-NPEPL1H3BU86 382 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 CYR61O00622 381 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 STX16O14662 325 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 HIST1H1TP22492 207 aaPredicted RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 GCAP28676 217 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 SLC29A2Q14542 456 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 TEX35Q5T0J7 233 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 ADGRD1Q6QNK2 874 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 ZNF793Q6ZN11 406 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 RPS19BP1Q86WX3 136 aaKnown RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 BCORP1Q8N888 145 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 NFAM1Q8NET5 270 aaPredicted RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 NPAS2Q99743 824 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 MAPKAP1Q9BPZ7 522 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 UTP23Q9BRU9 249 aaKnown RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 MRPL46Q9H2W6 279 aaKnown RBP19.11■□□□□ 0.65
SS18-224ENST00000584083 ANKRD10Q9NXR5 420 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 KCMF1Q9P0J7 381 aa19.11■□□□□ 0.65
SS18-224ENST00000584083 RELNP78509 3460 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 GABRR3A8MPY1 467 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 H0YIV9 168 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 MAN1A2O60476 641 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 CTNSO60931 367 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 CLDN9O95484 217 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 IFNA16P05015 189 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 PTX3P26022 381 aaPredicted RBP19.1■□□□□ 0.65
SS18-224ENST00000584083 PPP2R1BP30154 601 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 CCNG1P51959 295 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 RPS13P62277 151 aaKnown RBP19.1■□□□□ 0.65
SS18-224ENST00000584083 OC90Q02509 493 aaPredicted RBP19.1■□□□□ 0.65
SS18-224ENST00000584083 TUBA3CQ13748 450 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 INAQ16352 499 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 OR4C11Q6IEV9 310 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 TUBA3EQ6PEY2 450 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 TIFABQ6ZNK6 161 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 CDK15Q96Q40 435 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 SORBS1Q9BX66 1292 aaKnown RBP19.1■□□□□ 0.65
SS18-224ENST00000584083 DEFB126Q9BYW3 111 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 TXLNGYQ9BZA5 131 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 OLAHQ9NV23 265 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 FBXW2Q9UKT8 454 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 TSC22D4Q9Y3Q8 395 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 COL12A1Q99715 3063 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 LRRK2Q5S007 2527 aa19.1■□□□□ 0.65
SS18-224ENST00000584083 IQANK1A0A1B0GTG1 560 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 TGFBR3LH3BV60 316 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 OR7A17O14581 309 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 RASAL1O95294 804 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 CPN2P22792 545 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 CD96P40200 585 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 STX4Q12846 297 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 SLAMF1Q13291 335 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 ZRSR2Q15696 482 aaKnown RBP19.09■□□□□ 0.65
SS18-224ENST00000584083 ZNF766Q5HY98 468 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 LGI4Q8N135 537 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 L3MBTL4Q8NA19 623 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 ST6GALNAC3Q8NDV1 305 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 B3GNT7Q8NFL0 401 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 CCDC77Q9BR77 488 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 ADAP2Q9NPF8 381 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 PCTPQ9UKL6 214 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 HIVEP3Q5T1R4 2406 aa19.09■□□□□ 0.65
SS18-224ENST00000584083 PTPN13Q12923 2485 aa19.08■□□□□ 0.65
SS18-224ENST00000584083 TRBV11-1A0A0K0K1C0 115 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms