RNA–Protein interactions for RNA: ENST00000583389.5

EIF4A1-228, Transcript of eukaryotic translation initiation factor 4A1, humanhuman

TSL 3

Gene EIF4A1, Length 951 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF4A1-228ENST00000583389 VPS50Q96JG6 964 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 IP6K3Q96PC2 410 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 SEMA3GQ9NS98 782 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 RIC8BQ9NVN3 520 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 WDR70Q9NW82 654 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 VTI1BQ9UEU0 232 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 MCM8Q9UJA3 840 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 TMED5Q9Y3A6 229 aa13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 PTRH2Q9Y3E5 179 aaKnown RBP13.75□□□□□ -0.21
EIF4A1-228ENST00000583389 PIP5K1BO14986 540 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 CNOT3O75175 753 aaKnown RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 MYO1DO94832 1006 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 B3GALT4O96024 378 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 TLX1P31314 330 aaPredicted RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 BUD31P41223 144 aaPredicted RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 TRA2BP62995 288 aaKnown RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 OLR1P78380 273 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 HMGCS1Q01581 520 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 KLC1Q07866 573 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 SLAMF1Q13291 335 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 RUNX2Q13950 521 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 SSPNQ14714 243 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 SYT16Q17RD7 645 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 VWA2Q5GFL6 755 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 XKR7Q5GH72 579 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 SPDYAQ5MJ70 313 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 MRM1Q6IN84 353 aaKnown RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 CCDC81Q6ZN84 652 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 ZNF595Q8IYB9 648 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 LRRC34Q8IZ02 419 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 C1orf52Q8N6N3 182 aaKnown RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 PIWIL2Q8TC59 973 aaKnown RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 C19orf60Q96EN9 201 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 PEX11GQ96HA9 241 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 PPP3R2Q96LZ3 170 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 CRB3Q9BUF7 120 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 TUBB1Q9H4B7 451 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 ZNF395Q9H8N7 513 aaPredicted RBP13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 PRDM9Q9NQV7 894 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 C1orf109Q9NX04 203 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 IL17BQ9UHF5 180 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 MMACHCQ9Y4U1 282 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 CCL27Q9Y4X3 112 aa13.74□□□□□ -0.21
EIF4A1-228ENST00000583389 TRPC5OSA6NMA1 111 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 CLDN4O14493 209 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 EFSO43281 561 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 VPS4BO75351 444 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 EEDO75530 441 aaKnown RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 SKAP2O75563 359 aaPredicted RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 KLK1P06870 262 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 HEXBP07686 556 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 FAM58BPP0C7Q3 252 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 LINC00032P0C843 101 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 ACPPP15309 386 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 TPP2P29144 1249 aaPredicted RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 TIA1P31483 386 aaKnown RBP eCLIP13.73□□□□□ -0.212e-6■■□□□ 13.1
EIF4A1-228ENST00000583389 MAPK12P53778 367 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 NR6A1Q15406 480 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 UGT8Q16880 541 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 SMU1Q2TAY7 513 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 CCNYL2Q5T2Q4 361 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 SCIMPQ6UWF3 145 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 QSOX2Q6ZRP7 698 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 GPR180Q86V85 440 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 C11orf24Q96F05 449 aaPredicted RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 SOX17Q9H6I2 414 aaPredicted RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 WDR41Q9HAD4 459 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 LRTM1Q9HBL6 345 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 KCMF1Q9P0J7 381 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 C3orf18Q9UK00 162 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 ZMIZ1Q9ULJ6 1067 aa13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 WBP11Q9Y2W2 641 aaKnown RBP13.73□□□□□ -0.21
EIF4A1-228ENST00000583389 USP24Q9UPU5 2620 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 IDSB3KWA1 339 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 LSM1O15116 133 aaKnown RBP13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 HDAC3O15379 428 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 PCDH7O60245 1069 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 SEC22BO75396 215 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 UMODP07911 640 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 ATXN8OSP0DMR3 200 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 CPN2P22792 545 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 MMP11P24347 488 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 MAPK1P28482 360 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 PPP2R1BP30154 601 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 EMP2P54851 167 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 HSD17B7P56937 341 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 RPS18P62269 152 aaKnown RBP13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 TNFRSF17Q02223 184 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 MAD2L1Q13257 205 aaPredicted RBP13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 BIKQ13323 160 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 COL9A2Q14055 689 aaPredicted RBP13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 PDCD2Q16342 344 aaPredicted RBP13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 MINDY4Q4G0A6 757 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 ATP6AP1LQ52LC2 224 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 Q6ZSR9 355 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 PARP9Q8IXQ6 854 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 EFCAB3Q8N7B9 438 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 PLPP5Q8NEB5 264 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 METTL21AQ8WXB1 218 aa13.72□□□□□ -0.21
EIF4A1-228ENST00000583389 THAP4Q8WY91 577 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms