RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 ZCCHC7Q8N3Z6 543 aaKnown RBP13.23□□□□□ -0.29
GGA3-216ENST00000583282 KDF1Q8NAX2 398 aaPredicted RBP13.23□□□□□ -0.29
GGA3-216ENST00000583282 OR2Y1Q8NGV0 311 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 TBC1D20Q96BZ9 403 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 MAGEB18Q96M61 343 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 EFHD1Q9BUP0 239 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 LRTM1Q9HBL6 345 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 CPNE5Q9HCH3 593 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 AHSPQ9NZD4 102 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 C3orf18Q9UK00 162 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 DAPP1Q9UN19 280 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 ACACAQ13085 2346 aa13.23□□□□□ -0.29
GGA3-216ENST00000583282 IGLV3-12A0A075B6K2 115 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 GNG14A0A1W2PPG7 69 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 KLF7O75840 302 aaPredicted RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 SNUPNO95149 360 aaKnown RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 BMP10O95393 424 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 ONECUT2O95948 504 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 HEXBP07686 556 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 UMODP07911 640 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 NR2F6P10588 404 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 CPN2P22792 545 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 JAK1P23458 1154 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 TPP2P29144 1249 aaPredicted RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 TSFMP43897 325 aaKnown RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 HNRNPFP52597 415 aaKnown RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 EFNA3P52797 238 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 XKR7Q5GH72 579 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 CCNYL2Q5T2Q4 361 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 CCDC81Q6ZN84 652 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 TRIM46Q7Z4K8 759 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 CLNKQ7Z7G1 428 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 CRLF3Q8IUI8 442 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 TMEM52Q8NDY8 209 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 ADAMTS18Q8TE60 1221 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 TSLPQ969D9 159 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 TUBGCP3Q96CW5 907 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 C3orf30Q96M34 536 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 MESP1Q9BRJ9 268 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 C1orf50Q9BV19 199 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 NPLQ9BXD5 320 aaPredicted RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 GPR87Q9BY21 358 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 VN1R1Q9GZP7 353 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 SLC26A1Q9H2B4 701 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 DDX31Q9H8H2 851 aaKnown RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 WDR54Q9H977 334 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 LYRM4Q9HD34 91 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 LYARQ9NX58 379 aaKnown RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 TEX10Q9NXF1 929 aaPredicted RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 PSD3Q9NYI0 1048 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 PHF11Q9UIL8 331 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 HAO1Q9UJM8 370 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 MKL2Q9ULH7 1088 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.22□□□□□ -0.29
GGA3-216ENST00000583282 PCDHGA6Q9Y5G7 932 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 SPACA6W5XKT8 324 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 PCSK5Q92824 1860 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 SEC16AO15027 2179 aa13.22□□□□□ -0.29
GGA3-216ENST00000583282 SERTM1A2A2V5 107 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 VSTM2BA6NLU5 285 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 ZNF891A8MT65 544 aaPredicted RBP13.21□□□□□ -0.29
GGA3-216ENST00000583282 IDSB3KWA1 339 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 TCP11X1B4DZS4 312 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 LSM1O15116 133 aaKnown RBP13.21□□□□□ -0.29
GGA3-216ENST00000583282 EFSO43281 561 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 PEX11AO75192 247 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 SEC22BO75396 215 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 CREG1O75629 220 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 AIFM1O95831 613 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 FAM58BPP0C7Q3 252 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 TMPRSS3P57727 454 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 RAE1P78406 368 aaKnown RBP13.21□□□□□ -0.29
GGA3-216ENST00000583282 ID2Q02363 134 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 EEF1A2Q05639 463 aaKnown RBP13.21□□□□□ -0.29
GGA3-216ENST00000583282 CDC20Q12834 499 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 ST3GAL2Q16842 350 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 ATP6AP1LQ52LC2 224 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 VWA5B1Q5TIE3 1220 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 C18orf63Q68DL7 685 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 RNF165Q6ZSG1 346 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 Q6ZSR9 355 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 LANCL3Q6ZV70 420 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 KIRREL3Q8IZU9 778 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 MMP21Q8N119 569 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 CHTF18Q8WVB6 975 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 THOC1Q96FV9 657 aaKnown RBP13.21□□□□□ -0.29
GGA3-216ENST00000583282 CRELD1Q96HD1 420 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 SLC45A3Q96JT2 553 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 C7orf26Q96N11 449 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 OR1F2PQ96R84 312 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 RIC8BQ9NVN3 520 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 C1orf109Q9NX04 203 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 MCM8Q9UJA3 840 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 ADAM29Q9UKF5 820 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 ATG4BQ9Y4P1 393 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 CCL27Q9Y4X3 112 aa13.21□□□□□ -0.29
GGA3-216ENST00000583282 A0A087WV48 116 aa13.2□□□□□ -0.3
GGA3-216ENST00000583282 GOLGA8QA0A0J9YX86 632 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 301.4 ms