RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 MRGPREQ86SM8 312 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 RAB43Q86YS6 212 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 CLYBLQ8N0X4 340 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 TMEM52Q8NDY8 209 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 SREK1Q8WXA9 508 aaKnown RBP20.38■□□□□ 0.85
TSEN54-208ENST00000583173 CENPKQ9BS16 269 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 TUBB1Q9H4B7 451 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 EML4Q9HC35 981 aaKnown RBP20.38■□□□□ 0.85
TSEN54-208ENST00000583173 VPS29Q9UBQ0 182 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 ZDHHC2Q9UIJ5 367 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 ADAM29Q9UKF5 820 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 SLC12A4Q9UP95 1085 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 KCNMB2Q9Y691 235 aa20.38■□□□□ 0.85
TSEN54-208ENST00000583173 CACNA1GO43497 2377 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 HMGB1P1B2RPK0 211 aaPredicted RBP20.37■□□□□ 0.85
TSEN54-208ENST00000583173 NPIPB8E9PQR5 432 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 TMPRSS11DO60235 418 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 BGNP21810 368 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 BTG2P78543 158 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 SLAMF1Q13291 335 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 HHATQ5VTY9 493 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 SCIMPQ6UWF3 145 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 APLFQ8IW19 511 aaPredicted RBP20.37■□□□□ 0.85
TSEN54-208ENST00000583173 MRPL1Q9BYD6 325 aaKnown RBP20.37■□□□□ 0.85
TSEN54-208ENST00000583173 SIRT5Q9NXA8 310 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 P4HTMQ9NXG6 502 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 AHSPQ9NZD4 102 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 DNAJC15Q9Y5T4 150 aa20.37■□□□□ 0.85
TSEN54-208ENST00000583173 IGKV3D-11A0A0A0MRZ8 115 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 TMEM114B3SHH9 223 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 PCDH17O14917 1159 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 PROM1O43490 865 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 ALOX12BO75342 701 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 GRK2P25098 689 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 TPP2P29144 1249 aaPredicted RBP20.36■□□□□ 0.85
TSEN54-208ENST00000583173 SSR2P43308 183 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 RAP1GDS1P52306 607 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 HNRNPFP52597 415 aaKnown RBP20.36■□□□□ 0.85
TSEN54-208ENST00000583173 ABCE1P61221 599 aaKnown RBP20.36■□□□□ 0.85
TSEN54-208ENST00000583173 ATP1A4Q13733 1029 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 QSOX2Q6ZRP7 698 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 Q6ZSR9 355 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 SCUBE1Q8IWY4 988 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 OR11G2Q8NGC1 345 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 CSF3RQ99062 836 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 SORT1Q99523 831 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 COPS7BQ9H9Q2 264 aaPredicted RBP20.36■□□□□ 0.85
TSEN54-208ENST00000583173 NMRK1Q9NWW6 199 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 HAO1Q9UJM8 370 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 EPB41L3Q9Y2J2 1087 aaPredicted RBP20.36■□□□□ 0.85
TSEN54-208ENST00000583173 ATG4BQ9Y4P1 393 aa20.36■□□□□ 0.85
TSEN54-208ENST00000583173 B4GALT2O60909 372 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 LYPLA1O75608 230 aaPredicted RBP20.35■□□□□ 0.85
TSEN54-208ENST00000583173 KLK1P06870 262 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 HMGCS1Q01581 520 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 RHDQ02161 417 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 PCSK4Q6UW60 755 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 COMMD6Q7Z4G1 85 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 GPR180Q86V85 440 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 HOMEZQ8IX15 550 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 ADAMTS18Q8TE60 1221 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 APIPQ96GX9 242 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 RBCK1Q9BYM8 510 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 NKIRAS1Q9NYS0 192 aa20.35■□□□□ 0.85
TSEN54-208ENST00000583173 TMEM233B4DJY2 109 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 CDC123O75794 336 aaPredicted RBP20.34■□□□□ 0.85
TSEN54-208ENST00000583173 FAM58BPP0C7Q3 252 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 JAK1P23458 1154 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 PRPH2P23942 346 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 SLC1A6P48664 564 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 HNRNPH2P55795 449 aaKnown RBP20.34■□□□□ 0.85
TSEN54-208ENST00000583173 SOX8P57073 446 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 RAE1P78406 368 aaKnown RBP20.34■□□□□ 0.85
TSEN54-208ENST00000583173 BST1Q10588 318 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 STX3Q13277 289 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 KIAA0040Q15053 153 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 GALNT18Q6P9A2 607 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 ANKRD37Q7Z713 158 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 ZNF595Q8IYB9 648 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 MGARPQ8TDB4 240 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 EXTL1Q92935 676 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 C8orf44Q96CB5 159 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 PAIP2Q9BPZ3 127 aaKnown RBP20.34■□□□□ 0.85
TSEN54-208ENST00000583173 WDR77Q9BQA1 342 aaPredicted RBP20.34■□□□□ 0.85
TSEN54-208ENST00000583173 ZNF700Q9H0M5 742 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 NECTIN3Q9NQS3 549 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 PRDM9Q9NQV7 894 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 MMACHCQ9Y4U1 282 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 ATMQ13315 3056 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 MED13Q9UHV7 2174 aa20.34■□□□□ 0.85
TSEN54-208ENST00000583173 A0A1W2PR48 441 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 TGFBR3LH3BV60 316 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 PSMD12O00232 456 aaPredicted RBP20.33■□□□□ 0.85
TSEN54-208ENST00000583173 ATP8B1O43520 1251 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 PRMT3O60678 531 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 CTNSO60931 367 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 SNNO75324 88 aaPredicted RBP20.33■□□□□ 0.85
TSEN54-208ENST00000583173 SNUPNO95149 360 aaKnown RBP20.33■□□□□ 0.85
TSEN54-208ENST00000583173 GBAP04062 536 aa20.33■□□□□ 0.85
TSEN54-208ENST00000583173 C8orf89P0DMQ9 161 aa20.33■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms