RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 PHF21BQ96EK2 531 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 NPAS2Q99743 824 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 OR51B5Q9H339 312 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 IPPKQ9H8X2 491 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 LYRM4Q9HD34 91 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 TMCO1Q9UM00 188 aa18.26■□□□□ 0.51
SREBF1-220ENST00000581707 RTCAO00442 366 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 RIPK2O43353 540 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 PRAMEF2O60811 474 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 AGFG2O95081 481 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 EEF1DP29692 281 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 PIK3CBP42338 1070 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 ELOAQ14241 798 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 INAQ16352 499 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 AP5B1Q2VPB7 878 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 DEPDC1Q5TB30 811 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 KHDRBS2Q5VWX1 349 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 ZNF793Q6ZN11 406 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 RNF175Q8N4F7 328 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 BCORP1Q8N888 145 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 ACOT4Q8N9L9 421 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 ST6GALNAC3Q8NDV1 305 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 NFAM1Q8NET5 270 aaPredicted RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 REPS1Q96D71 796 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 CDCP1Q9H5V8 836 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 PNO1Q9NRX1 252 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 KCMF1Q9P0J7 381 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 XPR1Q9UBH6 696 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 TSC22D4Q9Y3Q8 395 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 POLEQ07864 2286 aa18.25■□□□□ 0.51
SREBF1-220ENST00000581707 SPTAN1Q13813 2472 aaKnown RBP18.25■□□□□ 0.51
SREBF1-220ENST00000581707 TGFBR3LH3BV60 316 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 SAP18O00422 153 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 MAN1A2O60476 641 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 CTNSO60931 367 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 SMIM24O75264 130 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 SEMA7AO75326 666 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 MYO1DO94832 1006 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 HIST1H1TP22492 207 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 GCAP28676 217 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 SSR2P43308 183 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 TUBA3CQ13748 450 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 CPSF6Q16630 551 aaKnown RBP eCLIP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 TUBA3EQ6PEY2 450 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 ADGRD1Q6QNK2 874 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 RPS19BP1Q86WX3 136 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 LGI4Q8N135 537 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 L3MBTL4Q8NA19 623 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 LRRN4CLQ8ND94 238 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 RGMAQ96B86 450 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 MTBPQ96DY7 904 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 CSF3RQ99062 836 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 MTERF1Q99551 399 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 MRPL57Q9BQC6 102 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 UTP23Q9BRU9 249 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 CENPKQ9BS16 269 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 TXLNGYQ9BZA5 131 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 DMRT3Q9NQL9 472 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 RNF11Q9Y3C5 154 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 CLDN16Q9Y5I7 305 aa18.24■□□□□ 0.51
SREBF1-220ENST00000581707 UTP20O75691 2785 aaKnown RBP18.24■□□□□ 0.51
SREBF1-220ENST00000581707 ZGRF1Q86YA3 2104 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 H0YIV9 168 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 STX16-NPEPL1H3BU86 382 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 STX16O14662 325 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 SCELO95171 688 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 PTX3P26022 381 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-220ENST00000581707 CD96P40200 585 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 ST13P50502 369 aaKnown RBP18.23■□□□□ 0.51
SREBF1-220ENST00000581707 RAP1GDS1P52306 607 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 PHEXP78562 749 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 TERF2Q15554 542 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 ZNF766Q5HY98 468 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 OR4C11Q6IEV9 310 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 TIFABQ6ZNK6 161 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 CLNKQ7Z7G1 428 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 B3GNT7Q8NFL0 401 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 ATP6V1E2Q96A05 226 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 TAAR6Q96RI8 345 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 MAPKAP1Q9BPZ7 522 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 DEFB126Q9BYW3 111 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 MRPL46Q9H2W6 279 aaKnown RBP18.23■□□□□ 0.51
SREBF1-220ENST00000581707 NOL11Q9H8H0 719 aaKnown RBP18.23■□□□□ 0.51
SREBF1-220ENST00000581707 OLAHQ9NV23 265 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 ANKRD10Q9NXR5 420 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 SPACA6W5XKT8 324 aa18.23■□□□□ 0.51
SREBF1-220ENST00000581707 SPTBN1Q01082 2364 aaKnown RBP18.23■□□□□ 0.51
SREBF1-220ENST00000581707 SYNDIG1LA6NDD5 238 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 GABRR3A8MPY1 467 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 OR7A17O14581 309 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 RASAL1O95294 804 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 CLDN9O95484 217 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 EDN3P14138 238 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 PPP2R1BP30154 601 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 ARL1P40616 181 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-220ENST00000581707 CCNG1P51959 295 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 RPS13P62277 151 aaKnown RBP18.22■□□□□ 0.51
SREBF1-220ENST00000581707 OC90Q02509 493 aaPredicted RBP18.22■□□□□ 0.51
SREBF1-220ENST00000581707 SLC29A2Q14542 456 aa18.22■□□□□ 0.51
SREBF1-220ENST00000581707 SIGLEC12Q96PQ1 595 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms