RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, human

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSNK1D-208	ENST00000578501	MAGEB10	Q96LZ2	347 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CENPK	Q9BS16	269 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RNF32	Q9H0A6	362 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ILKAP	Q9H0C8	392 aa	Predicted RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	KCMF1	Q9P0J7	381 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TMEM216	Q9P0N5	145 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DCDC2	Q9UHG0	476 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TEKT2	Q9UIF3	430 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MRPS33	Q9Y291	106 aa	Known RBP	12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RNF11	Q9Y3C5	154 aa		12.8	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DYTN	A2CJ06	578 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501		A8MT66	165 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CDK2AP1	O14519	115 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SLU7	O95391	586 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PYGB	P11216	843 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MAOA	P21397	527 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CERS1	P27544	350 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	UQCRFS1	P47985	274 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CCNG1	P51959	295 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SLC26A5	P58743	744 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HERVK_113	P63132	956 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CUL3	Q13618	768 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TLR1	Q15399	786 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TERF2	Q15554	542 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	INPP5J	Q15735	1006 aa	Predicted RBP	12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CPSF6	Q16630	551 aa	Known RBP eCLIP	12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	AP5B1	Q2VPB7	878 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	GGTA1P	Q4G0N0	100 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OR4C11	Q6IEV9	310 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZNF793	Q6ZN11	406 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LINC00696	Q6ZRV3	163 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SH2D5	Q6ZV89	423 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CUZD1	Q86UP6	607 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	IQCK	Q8N0W5	287 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SIRT6	Q8N6T7	355 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ACOT4	Q8N9L9	421 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	C7orf57	Q8NEG2	295 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OR52B6	Q8NGF0	335 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DNAJB14	Q8TBM8	379 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	WDR20	Q8TBZ3	569 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZNF483	Q8TF39	744 aa	Predicted RBP	12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ATP6V1E2	Q96A05	226 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	RGMA	Q96B86	450 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MTERF1	Q99551	399 aa	Known RBP	12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ERVK-6	Q9BXR3	956 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OR51B5	Q9H339	312 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZBTB26	Q9HCK0	441 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	NECTIN3	Q9NQS3	549 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PRTFDC1	Q9NRG1	225 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TBK1	Q9UHD2	729 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PCDHGA10	Q9Y5H3	936 aa		12.79	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SPEN	Q96T58	3664 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SAGE2P	A6NJ88	616 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CTNS	O60931	367 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	OTC	P00480	354 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ELAVL4	P26378	380 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	HSD17B3	P37058	310 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	VSNL1	P62760	191 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TRAF3	Q13114	568 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	DDX39B	Q13838	428 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZNF169	Q14929	603 aa	Predicted RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZRSR2	Q15696	482 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ABHD17B	Q5VST6	288 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	WDR93	Q6P2C0	686 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MAMDC2	Q7Z304	686 aa	Predicted RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	TICAM1	Q8IUC6	712 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SLC22A9	Q8IVM8	553 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LGI4	Q8N135	537 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZCCHC7	Q8N3Z6	543 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MYRIP	Q8NFW9	859 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ELP5	Q8TE02	316 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	ZNF354B	Q96LW1	612 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	NSUN5	Q96P11	429 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CDK15	Q96Q40	435 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PHF12	Q96QT6	1004 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	BARD1	Q99728	777 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	KCNK13	Q9HB14	408 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	MS4A12	Q9NXJ0	267 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	STMN3	Q9NZ72	180 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	LUZP4	Q9P127	313 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	PPIE	Q9UNP9	301 aa	Known RBP	12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CLDN16	Q9Y5I7	305 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CSAG2	Q9Y5P2	127 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	SPACA6	W5XKT8	324 aa		12.78	□□□□□ -0.36
CSNK1D-208	ENST00000578501	CACNA1D	Q01668	2161 aa		12.77	□□□□□ -0.36
CSNK1D-208	ENST00000578501		A0A1W2PPM1	405 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501		A1L4Q6	167 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ESPN	B1AK53	854 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	GOLGA8R	I6L899	631 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RTCA	O00442	366 aa	Known RBP	12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	PLPP1	O14494	284 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	DLX3	O60479	287 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	CDH16	O75309	829 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SEMA3D	O95025	777 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	IMPDH1	P20839	514 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	ATP5F1	P24539	256 aa	Predicted RBP	12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	SSR2	P43308	183 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	TNFSF10	P50591	281 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	RAP1GDS1	P52306	607 aa		12.77	□□□□□ -0.37
CSNK1D-208	ENST00000578501	HNRNPF	P52597	415 aa	Known RBP	12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms