RNA–Protein interactions for RNA: ENST00000577751.5

SS18-208, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-208ENST00000577751 GSTO2Q9H4Y5 243 aa18.15■□□□□ 0.5
SS18-208ENST00000577751 ZBTB20Q9HC78 741 aaPredicted RBP18.15■□□□□ 0.5
SS18-208ENST00000577751 NECTIN3Q9NQS3 549 aa18.15■□□□□ 0.5
SS18-208ENST00000577751 CLDN16Q9Y5I7 305 aa18.15■□□□□ 0.5
SS18-208ENST00000577751 HEMK1Q9Y5R4 338 aaPredicted RBP18.15■□□□□ 0.5
SS18-208ENST00000577751 TCRBV16S1A1N1A0A5B0 115 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 DPM1O60762 260 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 OR4F21O95013 312 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 MLYCDO95822 493 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 MAOAP21397 527 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 SSR2P43308 183 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 RAP1GDS1P52306 607 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 HNRNPFP52597 415 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 HSD17B7P56937 341 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 DNAJB13P59910 316 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 RCN2Q14257 317 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 AGAP7PQ5VUJ5 663 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 IRAK1BP1Q5VVH5 260 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 PAPD4Q6PIY7 484 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 IQCKQ8N0W5 287 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 ZCCHC7Q8N3Z6 543 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 RBMXL3Q8N7X1 1067 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 APOPT1Q96IL0 206 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 AGAP4Q96P64 663 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 CSF3RQ99062 836 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 SERPINI1Q99574 410 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 MAPKAP1Q9BPZ7 522 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 CENPKQ9BS16 269 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 SORBS1Q9BX66 1292 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 PRM3Q9NNZ6 103 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 OXSMQ9NWU1 459 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 MRPS33Q9Y291 106 aaKnown RBP18.14■□□□□ 0.49
SS18-208ENST00000577751 STK38LQ9Y2H1 464 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 PLLPQ9Y342 182 aa18.14■□□□□ 0.49
SS18-208ENST00000577751 SPTA1P02549 2419 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 CLDN4O14493 209 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 CELA2AP08217 269 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 CPA3P15088 417 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 BSGP35613 385 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 CASRP41180 1078 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 OR4D2P58180 307 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 NAA20P61599 178 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 AP2B1P63010 937 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 ZNF844Q08AG5 666 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 LCP2Q13094 533 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 IFT88Q13099 833 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 TTC19Q6DKK2 380 aaPredicted RBP18.13■□□□□ 0.49
SS18-208ENST00000577751 JMJD6Q6NYC1 403 aaPredicted RBP18.13■□□□□ 0.49
SS18-208ENST00000577751 ATG14Q6ZNE5 492 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 SRRM1Q8IYB3 904 aaKnown RBP18.13■□□□□ 0.49
SS18-208ENST00000577751 FAM47BQ8NA70 645 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 LPAR4Q99677 370 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 ELOVL6Q9H5J4 265 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 DDX31Q9H8H2 851 aaKnown RBP18.13■□□□□ 0.49
SS18-208ENST00000577751 PRTFDC1Q9NRG1 225 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 SNX6Q9UNH7 406 aa18.13■□□□□ 0.49
SS18-208ENST00000577751 CPAMD8Q8IZJ3 1885 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 A0A0A6YYD5 115 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 TGFBR3LH3BV60 316 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 CTNSO60931 367 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 SEMA3DO95025 777 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 ITGAMP11215 1152 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 SOX11P35716 441 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 CD97P48960 835 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 PKNOX1P55347 436 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 ACTN3Q08043 901 aaPredicted RBP18.12■□□□□ 0.49
SS18-208ENST00000577751 SLAMF1Q13291 335 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 EXT1Q16394 746 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 BTBD16Q32M84 506 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 NADK2Q4G0N4 442 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 CRB2Q5IJ48 1285 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 MRM1Q6IN84 353 aaKnown RBP18.12■□□□□ 0.49
SS18-208ENST00000577751 ISLR2Q6UXK2 745 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 GPRIN3Q6ZVF9 776 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 ARMC2Q8NEN0 867 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 M1APQ8TC57 530 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 BRIX1Q8TDN6 353 aaKnown RBP18.12■□□□□ 0.49
SS18-208ENST00000577751 LMF1Q96S06 567 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 FARSBQ9NSD9 589 aaKnown RBP18.12■□□□□ 0.49
SS18-208ENST00000577751 MID2Q9UJV3 735 aa18.12■□□□□ 0.49
SS18-208ENST00000577751 BLACEA4D250 179 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 UBFD1O14562 309 aaKnown RBP18.11■□□□□ 0.49
SS18-208ENST00000577751 SLC28A2O43868 658 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 EEDO75530 441 aaKnown RBP18.11■□□□□ 0.49
SS18-208ENST00000577751 ESRRBO95718 433 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 PDYNP01213 254 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 PLA2G2AP14555 144 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 NAGLUP54802 743 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 FAM219BQ5XKK7 198 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 H3F3CQ6NXT2 135 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 PRICKLE2Q7Z3G6 844 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 CCNYL1Q8N7R7 359 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 CDYL2Q8N8U2 506 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 CCDC63Q8NA47 563 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 AGAP11Q8TF27 550 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 SELENOMQ8WWX9 145 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 TM9SF4Q92544 642 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 SLC29A3Q9BZD2 475 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 BRF2Q9HAW0 419 aa18.11■□□□□ 0.49
SS18-208ENST00000577751 MMP25Q9NPA2 562 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms