RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 TPST1O60507 370 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 RPN2P04844 631 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 GPIP06744 558 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NAT2P11245 290 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ERGP11308 486 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 GSK3BP49841 420 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TFF2Q03403 129 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 EIF2B5Q13144 721 aaKnown RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 MAPKAPK3Q16644 382 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ZFP69Q49AA0 526 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ATG9BQ674R7 924 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ADNP2Q6IQ32 1131 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 LCN8Q6JVE9 175 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NOXRED1Q6NXP6 359 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 PTRH1Q86Y79 214 aaKnown RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 GALNT12Q8IXK2 581 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 DENND6BQ8NEG7 585 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 CLHC1Q8NHS4 586 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 JPH3Q8WXH2 748 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 GTF2H4Q92759 462 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 SCARF2Q96GP6 870 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 MTERF1Q99551 399 aaKnown RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 NRTNQ99748 197 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 AIFM2Q9BRQ8 373 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 EFCAB11Q9BUY7 163 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TRIM8Q9BZR9 551 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ADNPQ9H2P0 1102 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 DSN1Q9H410 356 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 FGF22Q9HCT0 170 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ACTR3BQ9P1U1 418 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ZNF639Q9UID6 485 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 KCNK6Q9Y257 313 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 PLEKHM1Q9Y4G2 1056 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NUP214P35658 2090 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 ARHGEF17Q96PE2 2063 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 ARHGAP33O14559 1287 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 PI15O43692 258 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NDUFS2O75306 463 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TSPAN9O75954 239 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NAGAP17050 411 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ENPP1P22413 925 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TACR1P25103 407 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 CLDN2P57739 230 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 LIPEQ05469 1076 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TDGQ13569 410 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 CATSPEREQ5SY80 951 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 C10orf62Q5T681 223 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 MED27Q6P2C8 311 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 THAP5Q7Z6K1 395 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 SPPL2CQ8IUH8 684 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 ADGRG5Q8IZF4 528 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 DYNC2LI1Q8TCX1 351 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 SETD7Q8WTS6 366 aaKnown RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 HMGB4Q8WW32 186 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TESCQ96BS2 214 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 REPS1Q96D71 796 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 C11orf24Q96F05 449 aaPredicted RBP13.2□□□□□ -0.3
RNF43-202ENST00000577625 TMEM74Q96NL1 305 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 TSSK3Q96PN8 268 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 MENTQ9BUN1 341 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 OSGEPL1Q9H4B0 414 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 DIABLOQ9NR28 239 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 CA5BQ9Y2D0 317 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 NEUROG3Q9Y4Z2 214 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 SNX5Q9Y5X3 404 aa13.2□□□□□ -0.3
RNF43-202ENST00000577625 GOLGA4Q13439 2230 aaKnown RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 MAGEB17A8MXT2 336 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 H0Y8X5 98 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 C1GALT1C1LP0DN25 315 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 SPNP16150 400 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 SHMT2P34897 504 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 GP2P55259 537 aaKnown RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 KIAA1024LP59773 190 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 DDX39BQ13838 428 aaKnown RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 ARHGAP19Q14CB8 494 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 ADPRMQ3LIE5 342 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 STEAP3Q658P3 488 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 PRSS48Q7RTY5 328 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 RIMKLAQ8IXN7 391 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 FLCNQ8NFG4 579 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 OR8J3Q8NGG0 315 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 HUS1BQ8NHY5 278 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 NDNFQ8TB73 568 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 SLC5A11Q8WWX8 675 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 PPM1MQ96MI6 270 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 HHIPQ96QV1 700 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 KCTD14Q9BQ13 255 aaPredicted RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 ZNF717Q9BY31 904 aaPredicted RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 C12orf4Q9NQ89 552 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 ADPRHL2Q9NX46 363 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 RUVBL1Q9Y265 456 aaKnown RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 WBP11Q9Y2W2 641 aaKnown RBP13.19□□□□□ -0.3
RNF43-202ENST00000577625 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
RNF43-202ENST00000577625 PRSS38A1L453 326 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 SNTNA6NMZ2 147 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 ERVH48-1M5A8F1 160 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 HOXC4P09017 264 aaPredicted RBP13.18□□□□□ -0.3
RNF43-202ENST00000577625 HTR1EP28566 365 aa13.18□□□□□ -0.3
RNF43-202ENST00000577625 SLBPQ14493 270 aaKnown RBP eCLIP13.18□□□□□ -0.3
RNF43-202ENST00000577625 MLF2Q15773 248 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms