RNA–Protein interactions for RNA: ENST00000577390.5

CDH8-203, Transcript of cadherin 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH8, Length 9,721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-203ENST00000577390 SKA3Q8IX90 412 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 SVOPLQ8N434 492 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 C7orf57Q8NEG2 295 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 OR4D6Q8NGJ1 314 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 C14orf105Q9NVL8 296 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 KCND2Q9NZV8 630 aa8.57□□□□□ -1.04
CDH8-203ENST00000577390 LAMB2P55268 1798 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ZNF850A8MQ14 1090 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 MBP02144 154 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ACTR1BP42025 376 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 EPHA4P54764 986 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PLCXD3Q63HM9 321 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 TATDN1Q6P1N9 297 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 KCTD18Q6PI47 426 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 WDR49Q8IV35 697 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 EMID1Q96A84 441 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 MXRA8Q9BRK3 442 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 DPEP3Q9H4B8 488 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 OAZ3Q9UMX2 235 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ATE1O95260 518 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 DUSP3P51452 185 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 LPCAT3Q6P1A2 487 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SLC2A14Q8TDB8 520 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 POP1Q99575 1024 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 IER2Q9BTL4 223 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 TRMT61BQ9BVS5 477 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 BTBD2Q9BX70 525 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PAK6Q9NQU5 681 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 TSPAN16Q9UKR8 245 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PCDHGB6Q9Y5F9 930 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 HRH3Q9Y5N1 445 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 A0A1B0GVI7 797 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 LACTBL1A8MY62 500 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SRPRAP08240 638 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 SNRPB2P08579 225 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 RFX5P48382 616 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 PRMT2P55345 433 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PCBP2Q15366 365 aaKnown RBP eCLIP8.56□□□□□ -1.04
CDH8-203ENST00000577390 MAMDC2Q7Z304 686 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 LILRB2Q8N423 598 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 CLEC1AQ8NC01 280 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ROPN1LQ96C74 230 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 AURKBQ96GD4 344 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 CDT1Q9H211 546 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 NARFLQ9H6Q4 476 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 RNF19AQ9NV58 838 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 RHOP08100 348 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 CD3GP09693 182 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 LINC00032P0C843 101 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PET100P0DJ07 73 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 KLF10Q13118 480 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 RAB35Q15286 201 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GRIK5Q16478 980 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SPOCD1Q6ZMY3 1216 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 RBFAQ8N0V3 343 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GPC2Q8N158 579 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ENPP3O14638 875 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 RP2O75695 350 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 S100A8P05109 93 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 MGST1P10620 155 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 GJA5P36382 358 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 KIR3DL1P43629 444 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SLC26A2P50443 739 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GK5Q6ZS86 529 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 NIPA2Q8N8Q9 360 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ASB15Q8WXK1 588 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 FOXRED1Q96CU9 486 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 RRNAD1Q96FB5 475 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 RNF157Q96PX1 679 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SCN2AQ99250 2005 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GJD2Q9UKL4 321 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 BTRCQ9Y297 605 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PLEKHM1Q9Y4G2 1056 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 B3GALT1Q9Y5Z6 326 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 ERVV-1B6SEH8 477 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 IFNA1P01562 189 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PEPDP12955 493 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 CBLP22681 906 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 CDK3Q00526 305 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GDF6Q6KF10 455 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 TMEM130Q8N3G9 435 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 PHOSPHO1Q8TCT1 267 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 NMUR1Q9HB89 426 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 NUFIP1Q9UHK0 495 aaKnown RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 LAMP5Q9UJQ1 280 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 A0A1W2PPM1 405 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 SOX1O00570 391 aaPredicted RBP8.56□□□□□ -1.04
CDH8-203ENST00000577390 TSPAN6O43657 245 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 B4GALT2O60909 372 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ATG12O94817 140 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 DDCP20711 480 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 CD9P21926 228 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 GDI1P31150 447 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 HSD17B7P56937 341 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 WSCD2Q2TBF2 565 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 TOR2AQ5JU69 321 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 ADGRD2Q7Z7M1 963 aa8.56□□□□□ -1.04
CDH8-203ENST00000577390 TCEAL4Q96EI5 215 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms