RNA–Protein interactions for RNA: ENST00000576502.5

NDE1-211, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 2

Gene NDE1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-211ENST00000576502 C4orf51C9J302 202 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 FAM227AF5H4B4 570 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 H0YIV9 168 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 RIPK2O43353 540 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 DYRK3O43781 588 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PRAMEF4O60810 478 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 RASAL1O95294 804 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CLDN9O95484 217 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 TGFB1P01137 390 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CD46P15529 392 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 HIST1H1TP22492 207 aaPredicted RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 EEF1DP29692 281 aaKnown RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 PPP2R1BP30154 601 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 UQCRFS1P47985 274 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CLCN2P51788 898 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 BIKQ13323 160 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 RUNX2Q13950 521 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 SERTAD2Q14140 314 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PRAMEF9Q5VWM5 478 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 ADGRD1Q6QNK2 874 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CLEC18BQ6UXF7 455 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 GOLGA7Q7Z5G4 137 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 RPS19BP1Q86WX3 136 aaKnown RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 CRLF3Q8IUI8 442 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 SCUBE1Q8IWY4 988 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 BEST3Q8N1M1 668 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 FAM47BQ8NA70 645 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 TMEM178AQ8NBL3 297 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CLEC18CQ8NCF0 446 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 CATSPER1Q8NEC5 780 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 B3GNT7Q8NFL0 401 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 DNAJB8Q8NHS0 232 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 HUS1BQ8NHY5 278 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PRR7Q8TB68 274 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 ELP5Q8TE02 316 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.96□□□□□ -0.33
NDE1-211ENST00000576502 DAZLQ92904 295 aaKnown RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 VMP1Q96GC9 406 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 BARD1Q99728 777 aaKnown RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 AICDAQ9GZX7 198 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PPCSQ9HAB8 311 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PRDM7Q9NQW5 492 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PNO1Q9NRX1 252 aaKnown RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 PSMC3IPQ9P2W1 217 aaPredicted RBP12.96□□□□□ -0.33
NDE1-211ENST00000576502 PHF11Q9UIL8 331 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 PCDHGB6Q9Y5F9 930 aa12.96□□□□□ -0.33
NDE1-211ENST00000576502 ZGRF1Q86YA3 2104 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 PTPN13Q12923 2485 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 GABRR3A8MPY1 467 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 CTNSO60931 367 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 DNAJB6O75190 326 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 MYO1DO94832 1006 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 SCELO95171 688 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 CBX6O95503 412 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 DDAH2O95865 285 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 IFNA16P05015 189 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 COX7A2P14406 83 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 CPN2P22792 545 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 ATP5A1P25705 553 aaKnown RBP12.95□□□□□ -0.34
NDE1-211ENST00000576502 OC90Q02509 493 aaPredicted RBP12.95□□□□□ -0.34
NDE1-211ENST00000576502 ELAVL1Q15717 326 aaKnown RBP12.95□□□□□ -0.34
NDE1-211ENST00000576502 CPSF6Q16630 551 aaKnown RBP eCLIP12.95□□□□□ -0.34
NDE1-211ENST00000576502 ZNF766Q5HY98 468 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 DEPDC1Q5TB30 811 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 TTC19Q6DKK2 380 aaPredicted RBP12.95□□□□□ -0.34
NDE1-211ENST00000576502 OR4C11Q6IEV9 310 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 TIFABQ6ZNK6 161 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 PLD6Q8N2A8 252 aaKnown RBP12.95□□□□□ -0.34
NDE1-211ENST00000576502 ACOT4Q8N9L9 421 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 L3MBTL4Q8NA19 623 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 ACMSDQ8TDX5 336 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 PHF21BQ96EK2 531 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 WDR41Q9HAD4 459 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 DMRT3Q9NQL9 472 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 NECTIN3Q9NQS3 549 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 PSD3Q9NYI0 1048 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 AHSPQ9NZD4 102 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 PPT2Q9UMR5 302 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 CLCA3PQ9Y6N3 262 aa12.95□□□□□ -0.34
NDE1-211ENST00000576502 SPTBN1Q01082 2364 aaKnown RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 POLEQ07864 2286 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 A8MUA0 341 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 FOXE1O00358 373 aaPredicted RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 E2F3O00716 465 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 SIX3O95343 332 aaPredicted RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 TBX6O95947 436 aaPredicted RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 OTCP00480 354 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 F10P00742 488 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 BUD31P41223 144 aaPredicted RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 CYB561P49447 251 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 PER3P56645 1201 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 IFT88Q13099 833 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 MRPL49Q13405 166 aaKnown RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 CUL3Q13618 768 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 OR1C1Q15619 314 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 TEX35Q5T0J7 233 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 UBAP2Q5T6F2 1119 aaKnown RBP12.94□□□□□ -0.34
NDE1-211ENST00000576502 FCRLBQ6BAA4 426 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 ADNP2Q6IQ32 1131 aa12.94□□□□□ -0.34
NDE1-211ENST00000576502 CYP20A1Q6UW02 462 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms