RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 PRAMEF13Q5VWM6 474 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 RAET1GQ6H3X3 334 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TUBA3EQ6PEY2 450 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SLC9B2Q86UD5 537 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 C12orf40Q86WS4 652 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 FAM129CQ86XR2 697 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 LACC1Q8IV20 430 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 MMP21Q8N119 569 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 STX19Q8N4C7 294 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 OR2L2Q8NH16 312 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PSMA8Q8TAA3 256 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 UTP15Q8TED0 518 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CRELD1Q96HD1 420 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF514Q96K75 400 aaPredicted RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 MAPKAP1Q9BPZ7 522 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 SORBS1Q9BX66 1292 aaKnown RBP8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CRISPLD2Q9H0B8 497 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 CXorf36Q9H7Y0 433 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 FTSJ1Q9UET6 329 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 KCND3Q9UK17 655 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 DUSP12Q9UNI6 340 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 A3GALT2U3KPV4 340 aa8.54□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM43BA6NCK2 446 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ZAR1LA6NP61 321 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ZBBXA8MT70 800 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TAF4O00268 1085 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 SLC9A3R1O14745 358 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 DSCR3O14972 297 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 GADD45GO95257 159 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TBX6O95947 436 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 PTHP01270 115 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 CYP17A1P05093 508 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 RPLP0P05388 317 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ITGB7P26010 798 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ST8SIA6P61647 398 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 DPTQ07507 201 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 NFE2L1Q14494 772 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF770Q6IQ21 691 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 FAM83HQ6ZRV2 1179 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 RTL10Q7L3V2 364 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM43Q96BQ3 446 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 LRRC3BQ96PB8 259 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 IL17FQ96PD4 163 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 OR52A5Q9H2C5 316 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 MS4A12Q9NXJ0 267 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 RAB23Q9ULC3 237 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 SLC6A14Q9UN76 642 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 GPR34Q9UPC5 381 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 FAM32AQ9Y421 112 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 CFAP20Q9Y6A4 193 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 SH3D21A4FU49 640 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 AGAP5A6NIR3 686 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TBX19O60806 448 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 MMP20O60882 483 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 GASTP01350 101 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ADH5P11766 374 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 C6P13671 934 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ST3GAL4Q11206 333 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 DNASE1L3Q13609 305 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 PTGES3Q15185 160 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TCEAL5Q5H9L2 206 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TOR1AIP1Q5JTV8 583 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 SAXO2Q658L1 398 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 KLHL17Q6TDP4 642 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ZNF367Q7RTV3 350 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 C11orf96Q7Z7L8 435 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TRIM73Q86UV7 250 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ADGRF3Q8IZF5 1079 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 CADM3Q8N126 398 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 AQP11Q8NBQ7 271 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 TMIEQ8NEW7 156 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 B3GNT7Q8NFL0 401 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 C9orf43Q8TAL5 461 aaPredicted RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 APOBEC4Q8WW27 367 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 NXPE3Q969Y0 559 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 GTPBP3Q969Y2 492 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 NEURL3Q96EH8 262 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 PDXPQ96GD0 296 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 PPP1R16AQ96I34 528 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 CDCA4Q9BXL8 241 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 NLNQ9BYT8 704 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 RHBGQ9H310 441 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 A4GALTQ9NPC4 353 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 PRDM8Q9NQV8 689 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 INIPQ9NRY2 104 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 IMPAD1Q9NX62 359 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 CCDC59Q9P031 241 aaKnown RBP8.53□□□□□ -1.04
NCBP3-204ENST00000574911 ENOPH1Q9UHY7 261 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 SLC27A6Q9Y2P4 619 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 KIAA1549LQ6ZVL6 1849 aa8.53□□□□□ -1.04
NCBP3-204ENST00000574911 EFCAB10A6NFE3 127 aa8.52□□□□□ -1.04
NCBP3-204ENST00000574911 M0R129 80 aa8.52□□□□□ -1.04
NCBP3-204ENST00000574911 HOXC11O43248 304 aaPredicted RBP8.52□□□□□ -1.04
NCBP3-204ENST00000574911 VEGFDO43915 354 aa8.52□□□□□ -1.04
NCBP3-204ENST00000574911 UPK1BO75841 260 aa8.52□□□□□ -1.04
NCBP3-204ENST00000574911 IFNW1P05000 195 aa8.52□□□□□ -1.04
NCBP3-204ENST00000574911 ADRA2AP08913 450 aa8.52□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms