RNA–Protein interactions for RNA: ENST00000574728.1

PRPF8-211, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 466 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-211ENST00000574728 THRAP10827 490 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 TPSB2P20231 275 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 DUSP1P28562 367 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PDHA2P29803 388 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 GALNSP34059 522 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 EIF2S3P41091 472 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 ETV5P41161 510 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PRLHRP49683 370 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 LIMK2P53671 638 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 DRG2P55039 364 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PPP1CAP62136 330 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 RAE1P78406 368 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CRADDP78560 199 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CDH17Q12864 832 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 NFE2L1Q14494 772 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PRPSAP1Q14558 356 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 KIR2DS5Q14953 304 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 MFSD13AQ14CX5 517 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 TPSAB1Q15661 275 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 RPE65Q16518 533 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CLPPQ16740 277 aaPredicted RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 BTBD16Q32M84 506 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 GPR33Q49SQ1 333 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 LDLRAP1Q5SW96 308 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 FCRLBQ6BAA4 426 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CAPRIN2Q6IMN6 1127 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 LIN54Q6MZP7 749 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CCDC70Q6NSX1 233 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 ACSM6Q6P461 480 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 TMEM220Q6QAJ8 160 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PACS1Q6VY07 963 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 DCDC5Q6ZRR9 648 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 RINLQ6ZS11 566 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SNX20Q7Z614 316 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 LRRTM4Q86VH4 590 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 GALNT4Q8N4A0 578 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CLDN19Q8N6F1 224 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 NAT8LQ8N9F0 302 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 FAM98AQ8NCA5 519 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 OR6C4Q8NGE1 309 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 OR52L2PQ8NGH6 319 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 OR1N1Q8NGS0 311 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 LKAAEAR1Q8TD35 194 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SLCO2A1Q92959 643 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PEX13Q92968 403 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 ZG16BQ96DA0 208 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 REXO5Q96IC2 774 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 RMDN2Q96LZ7 410 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PPP1R2P1Q96PQ5 205 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 KIFC1Q9BW19 673 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SORBS1Q9BX66 1292 aaKnown RBP4.6□□□□□ -1.67
PRPF8-211ENST00000574728 TBC1D10AQ9BXI6 508 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 AP1M1Q9BXS5 423 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 OR52A5Q9H2C5 316 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PRDM13Q9H4Q3 707 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 ASB8Q9H765 288 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 RDH14Q9HBH5 336 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SLC40A1Q9NP59 571 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 KCNK9Q9NPC2 374 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 CHRAC1Q9NRG0 131 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SEMA5BQ9P283 1151 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 MOSPD1Q9UJG1 213 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 VPS4AQ9UN37 437 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 SATB2Q9UPW6 733 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 PKP3Q9Y446 797 aa4.6□□□□□ -1.67
PRPF8-211ENST00000574728 FLNBO75369 2602 aaKnown RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 SETXQ7Z333 2677 aaKnown RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 RELNP78509 3460 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 ZCWPW2A0A1B0GU75 182 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 SLC5A10A0PJK1 596 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 PGRMC1O00264 195 aaKnown RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CLIC1O00299 241 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 PSMD3O43242 534 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 ZSCAN12O43309 604 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 PIP5K1CO60331 668 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 KCNJ13O60928 360 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CPNE6O95741 557 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 GOT2P00505 430 aaKnown RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 KRT14P02533 472 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 C9P02748 559 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CHRM5P08912 532 aaPredicted RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 FGF3P11487 239 aaPredicted RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CCL4P13236 92 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 MSNP26038 577 aaKnown RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 ACADLP28330 430 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 NMBRP28336 390 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 THBS4P35443 961 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 HADHAP40939 763 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 FNTAP49354 379 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 GFERP55789 205 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CDK16Q00536 496 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 PDE1BQ01064 536 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 TLE3Q04726 772 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 CACNG1Q06432 222 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 MN1Q10571 1320 aaPredicted RBP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 SF3A3Q12874 501 aaKnown RBP eCLIP4.59□□□□□ -1.67
PRPF8-211ENST00000574728 ITGA9Q13797 1035 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 GPR18Q14330 331 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 GRB7Q14451 532 aa4.59□□□□□ -1.67
PRPF8-211ENST00000574728 LARS2Q15031 903 aaKnown RBP4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms