RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 VIPR1P32241 457 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF630Q2M218 657 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 BCL7AQ4VC05 210 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 SPOUT1Q5T280 376 aaKnown RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF770Q6IQ21 691 aaPredicted RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 OR2A12Q8NGT7 310 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF480Q8WV37 535 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 MRPS31Q92665 395 aaKnown RBP18.22■□□□□ 0.51
SCARF1-206ENST00000573852 CEP19Q96LK0 163 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 BARHL1Q9BZE3 327 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 TAS2R9Q9NYW1 312 aa18.22■□□□□ 0.51
SCARF1-206ENST00000573852 FFAR1O14842 300 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 ARAFP10398 606 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 ZNF30P17039 623 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 RHCEP18577 417 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 PBLDP30039 288 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 RPS19P39019 145 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 TAS2R50P59544 299 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SLC7A9P82251 487 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SLBPQ14493 270 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 STARD3Q14849 445 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 LRRC26Q2I0M4 334 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 HENMT1Q5T8I9 393 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SLC44A2Q8IWA5 706 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 MMP21Q8N119 569 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 OR8H2Q8N162 312 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 VANGL1Q8TAA9 524 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 OR2A14Q96R47 310 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 C11orf16Q9NQ32 467 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 CLEC2DQ9UHP7 191 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 PRRC2BQ5JSZ5 2229 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 PLXNA2O75051 1894 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 A0A075B6Q4 140 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 PDZK1P1A8MUH7 402 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 LEFTY2O00292 366 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 URODP06132 367 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 IGFBP1P08833 259 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 CKMT1AP12532 417 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 NPPBP16860 134 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 S100A1P23297 94 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SOAT1P35610 550 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SOX3P41225 446 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 GJA8P48165 433 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 MEF2AQ02078 507 aaPredicted RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 PUM1Q14671 1186 aaKnown RBP eCLIP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 NXNL2Q5VZ03 156 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 FAM71E1Q6IPT2 247 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 FAM180BQ6P0A1 224 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 TRAM1L1Q8N609 369 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 FAM83CQ9BQN1 747 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 CCDC32Q9BV29 185 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 RC3H2Q9HBD1 1191 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 SMURF1Q9HCE7 757 aa18.21■□□□□ 0.51
SCARF1-206ENST00000573852 EXOSC4Q9NPD3 245 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 LAMA2P24043 3122 aaKnown RBP18.21■□□□□ 0.51
SCARF1-206ENST00000573852 TRBV4-1A0A0J9YWV2 114 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 FAM47E-STBD1D6RA91 191 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 GRM6O15303 877 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 MPZL2O60487 215 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 CYP7B1O75881 506 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 IFNA14P01570 189 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 PTPN2P17706 415 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 FEN1P39748 380 aaKnown RBP18.2■□□□□ 0.5
SCARF1-206ENST00000573852 LIM2P55344 173 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 CCL23P55773 120 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 OR2B6P58173 313 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 DCDC1P59894 354 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 TBPL1P62380 186 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 NRARPQ7Z6K4 114 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 TMEM25Q86YD3 366 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 CACTIN-AS1Q8N1I8 211 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 BTN2A2Q8WVV5 523 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 NEDD4LQ96PU5 975 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 ASPNQ9BXN1 380 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 MARCH7Q9H992 704 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 SLC25A19Q9HC21 320 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 DMRT3Q9NQL9 472 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 DENND4CQ5VZ89 1909 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 AP3D1O14617 1153 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 ATG13O75143 517 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 IFNW1P05000 195 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 C6orf183Q5T699 404 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 TMC5Q6UXY8 1006 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 WDR53Q7Z5U6 358 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-206ENST00000573852 LAS2Q8IYD9 372 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 TAGAPQ8N103 731 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 FAM46DQ8NEK8 389 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 OR6F1Q8NGZ6 308 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 SPNS1Q9H2V7 528 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 CRNNQ9UBG3 495 aaPredicted RBP18.2■□□□□ 0.5
SCARF1-206ENST00000573852 ENOPH1Q9UHY7 261 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 MUTYHQ9UIF7 546 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 TRAPPC4Q9Y296 219 aa18.2■□□□□ 0.5
SCARF1-206ENST00000573852 LSM2Q9Y333 95 aaKnown RBP18.2■□□□□ 0.5
SCARF1-206ENST00000573852 DSPPQ9NZW4 1301 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 A0A1W2PRB8 838 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 ZNF197O14709 1029 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 SCG5P05408 212 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 KLK1P06870 262 aa18.19■□□□□ 0.5
SCARF1-206ENST00000573852 CYP2A6P11509 494 aaPredicted RBP18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms