RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 PKNOX1P55347 436 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 RHAGQ02094 409 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 NFATC3Q12968 1075 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 RAPSNQ13702 412 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 ABRAXAS2Q15018 415 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 ZCCHC23Q6ZST2 131 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 MED25Q71SY5 747 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 ACOT4Q8N9L9 421 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 TMEM102Q8N9M5 508 aaPredicted RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 SRFBP1Q8NEF9 429 aaKnown RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 SELENOMQ8WWX9 145 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 RGMAQ96B86 450 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 PKNOX2Q96KN3 472 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 TBCDQ9BTW9 1192 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 GATA5Q9BWX5 397 aaPredicted RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 NPLQ9BXD5 320 aaPredicted RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 ZNF717Q9BY31 904 aaPredicted RBP14.88□□□□□ -0.03
CHD3-215ENST00000572750 SLC29A3Q9BZD2 475 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 TNFRSF12AQ9NP84 129 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 SNX6Q9UNH7 406 aa14.88□□□□□ -0.03
CHD3-215ENST00000572750 DOPEY1Q5JWR5 2465 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 IGHV3-20A0A0C4DH32 117 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 GOLGA6L10A6NI86 522 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 A6NL46 340 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 MANBAO00462 879 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 TRIM13O60858 407 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 SCELO95171 688 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 ESRRBO95718 433 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 ENO1P06733 434 aaKnown RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 H2AFXP16104 143 aaPredicted RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 MAOAP21397 527 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 IL10P22301 178 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 PTX3P26022 381 aaPredicted RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 ETV4P43268 484 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 CCL11P51671 97 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 HNRNPFP52597 415 aaKnown RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 RAB38P57729 211 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 BTG2P78543 158 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 CUL3Q13618 768 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 AP5B1Q2VPB7 878 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 C10orf62Q5T681 223 aaPredicted RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 OR4C11Q6IEV9 310 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 TMEM205Q6UW68 189 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 AMER2Q8N7J2 671 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 CLEC1AQ8NC01 280 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 TMEM52Q8NDY8 209 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 METTL6Q8TCB7 284 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 METTL21AQ8WXB1 218 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 NACC2Q96BF6 587 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 FER1L6-AS2Q96M78 137 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 SERPINI1Q99574 410 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 MAPKAP1Q9BPZ7 522 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 MRPL1Q9BYD6 325 aaKnown RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 ROGDIQ9GZN7 287 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 CLK4Q9HAZ1 481 aaKnown RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 ZNF160Q9HCG1 818 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 SSU72Q9NP77 194 aaKnown RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 ARGLU1Q9NWB6 273 aaPredicted RBP14.87□□□□□ -0.03
CHD3-215ENST00000572750 PPT2Q9UMR5 302 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 DAPP1Q9UN19 280 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 SLC12A4Q9UP95 1085 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 TIMM22Q9Y584 194 aa14.87□□□□□ -0.03
CHD3-215ENST00000572750 CREBBPQ92793 2442 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 IGHV1-45A0A0A0MS14 117 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 EEDO75530 441 aaKnown RBP14.86□□□□□ -0.03
CHD3-215ENST00000572750 CRCPO75575 148 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 SEC24DO94855 1032 aaPredicted RBP14.86□□□□□ -0.03
CHD3-215ENST00000572750 SEMA3DO95025 777 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 KRT6AP02538 564 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 GBAP04062 536 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 KRT6BP04259 564 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 NR1D1P20393 614 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 BSGP35613 385 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 KRT6CP48668 564 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 NAA20P61599 178 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 PCOLCEQ15113 449 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 NSDHLQ15738 373 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 QSOX2Q6ZRP7 698 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 ANKRD37Q7Z713 158 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 NUDT13Q86X67 352 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 EFCAB3Q8N7B9 438 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 ABHD17AQ96GS6 310 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 STMN4Q9H169 189 aaPredicted RBP14.86□□□□□ -0.03
CHD3-215ENST00000572750 FBXW2Q9UKT8 454 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 ACTL7BQ9Y614 415 aa14.86□□□□□ -0.03
CHD3-215ENST00000572750 LOC102723996A0A087X1L8 192 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 A0A0A6YYD5 115 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 NSG1A0A0A6YYJ2 146 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 A0A1W2PQ72 361 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 MKRN2OSH3BPM6 223 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 K7EM74 188 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 PRMT3O60678 531 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 PRKRAO75569 313 aaKnown RBP14.85□□□□□ -0.03
CHD3-215ENST00000572750 HPP00738 406 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 CHRNGP07510 517 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 BPGMP07738 259 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 CELA2AP08217 269 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 CYC1P08574 325 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 CHN1P15882 459 aa14.85□□□□□ -0.03
CHD3-215ENST00000572750 TSFMP43897 325 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms