RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 ATP5A1P25705 553 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RAP1GDS1P52306 607 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 HSD17B7P56937 341 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ID2Q02363 134 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 PCBP2Q15366 365 aaKnown RBP eCLIP16.63■□□□□ 0.253e-8■■■■■ 157.6
CTDNEP1-207ENST00000572043 OR1C1Q15619 314 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CPSF6Q16630 551 aaKnown RBP eCLIP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 AP5B1Q2VPB7 878 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 TMEM35AQ53FP2 167 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF766Q5HY98 468 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 KHDRBS2Q5VWX1 349 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CHSY3Q70JA7 882 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RPS19BP1Q86WX3 136 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ACOT4Q8N9L9 421 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 SRFBP1Q8NEF9 429 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 NFAM1Q8NET5 270 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ADAMTS18Q8TE60 1221 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 SSC4DQ8WTU2 575 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 THAP3Q8WTV1 239 aaPredicted RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ATP6V1E2Q96A05 226 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ISL2Q96A47 359 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 CMTM7Q96FZ5 175 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 MAPKAP1Q9BPZ7 522 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 TBCDQ9BTW9 1192 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 NOL11Q9H8H0 719 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF180Q9UJW8 692 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RNF11Q9Y3C5 154 aa16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 TNPO3Q9Y5L0 923 aaKnown RBP16.63■□□□□ 0.25
CTDNEP1-207ENST00000572043 RIPK2O43353 540 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 SMIM24O75264 130 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 SNRPAP09012 282 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 EDN3P14138 238 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 HIST1H1TP22492 207 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 CNTFP26441 200 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 TPP2P29144 1249 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 NEK2P51955 445 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 RPS13P62277 151 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 PCDH1Q08174 1060 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 RCN2Q14257 317 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF468Q5VIY5 522 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 LIPJQ5W064 366 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZNF595Q8IYB9 648 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 B3GNT7Q8NFL0 401 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 OR52B6Q8NGF0 335 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 MTFMTQ96DP5 389 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 NSUN5Q96P11 429 aaKnown RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 DEFB126Q9BYW3 111 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 ROGDIQ9GZN7 287 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 DMRT3Q9NQL9 472 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 KCMF1Q9P0J7 381 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 ERRFI1Q9UJM3 462 aaPredicted RBP16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 OSGIN2Q9Y236 505 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 CLDN16Q9Y5I7 305 aa16.62■□□□□ 0.25
CTDNEP1-207ENST00000572043 RELNP78509 3460 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 MYO18BQ8IUG5 2567 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 A1L4Q6 167 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 OR7A17O14581 309 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 LDB3O75112 727 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 MYBL2P10244 700 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 CPN2P22792 545 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 GCAP28676 217 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 SERPINB1P30740 379 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 KCNK10P57789 538 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 STX4Q12846 297 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 SLAMF1Q13291 335 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 TSNAXIP1Q2TAA8 658 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 TEX35Q5T0J7 233 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 DEPDC1Q5TB30 811 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 OR4C11Q6IEV9 310 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 RPS27LQ71UM5 84 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 TRMT10CQ7L0Y3 403 aaKnown RBP16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 MDS2Q8NDY4 140 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 NCLNQ969V3 563 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 PSMG3-AS1Q96PY0 264 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 SLX1AQ9BQ83 275 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 LYRM4Q9HD34 91 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 PCDHGA11Q9Y5H2 935 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 SPACA6W5XKT8 324 aa16.61■□□□□ 0.25
CTDNEP1-207ENST00000572043 PLPP1O14494 284 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 CTNSO60931 367 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 ABHD2P08910 425 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 TNNI3P19429 210 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 MST1P26927 711 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 CLCN2P51788 898 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 CCNG1P51959 295 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 PHEXP78562 749 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 ZRSR2Q15696 482 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 INAQ16352 499 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 LGSNQ5TDP6 509 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 OR4N5Q8IXE1 308 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 APCDD1LQ8NCL9 501 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 NR4A3Q92570 626 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 RGMAQ96B86 450 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 REPS1Q96D71 796 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 C5orf34Q96MH7 638 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 CENPKQ9BS16 269 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 ALOXE3Q9BYJ1 711 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 LIN28AQ9H9Z2 209 aaKnown RBP16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 ADAP2Q9NPF8 381 aa16.6■□□□□ 0.25
CTDNEP1-207ENST00000572043 SEMA4BQ9NPR2 832 aaPredicted RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms