RNA–Protein interactions for RNA: ENST00000571643.5

CDC27-213, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-213ENST00000571643 SLC16A4O15374 487 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TGFB1I1O43294 461 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CACNG3O60359 315 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 LMX1BO60663 402 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CSDE1O75534 798 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 RGS11O94810 467 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 DIRAS3O95661 229 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 KRT8P05787 483 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 VIMP08670 466 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 KRT3P12035 628 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CTNNA2P26232 953 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ALDH4A1P30038 563 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SSTR2P30874 369 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 STX2P32856 288 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 S100A5P33763 92 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SYKP43405 635 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 RAB28P51157 221 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 BLVRAP53004 296 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 AP3M2P53677 418 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 MAP3K7CLP57077 242 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 HILS1P60008 231 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CEBPZQ03701 1054 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 SMARCB1Q12824 385 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SCGB2A2Q13296 93 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ITGADQ13349 1161 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 DDX39BQ13838 428 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 ZBTB6Q15916 424 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 USP41Q3LFD5 358 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 KRTAP24-1Q3LI83 254 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 AARDQ4LEZ3 155 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 HERC4Q5GLZ8 1057 aaPredicted RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 FAM72AQ5TYM5 149 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ARHGAP17Q68EM7 881 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 FAM72DQ6L9T8 149 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TTI2Q6NXR4 508 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 FAM173BQ6P4H8 233 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ZCCHC12Q6PEW1 402 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TMPRSS12Q86WS5 348 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 FAM72BQ86X60 149 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ZCCHC7Q8N3Z6 543 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 RASGEF1CQ8N431 466 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 MINDY1Q8N5J2 469 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PARP16Q8N5Y8 322 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TRIML2Q8N7C3 387 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 RBM15BQ8NDT2 890 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 LPCAT1Q8NF37 534 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 GJC3Q8NFK1 279 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ACMSDQ8TDX5 336 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 GANCQ8TET4 914 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SNAPC3Q92966 411 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SMARCE1Q969G3 411 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 HDAC11Q96DB2 347 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TMCO6Q96DC7 493 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 C14orf79Q96F83 325 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PERPQ96FX8 193 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PIWIL1Q96J94 861 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 ART5Q96L15 291 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 NECTIN4Q96NY8 510 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CATSPER2Q96P56 530 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 GAD1Q99259 594 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PIP5K1AQ99755 562 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 EGFL8Q99944 293 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PKP2Q99959 881 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 BCL7BQ9BQE9 202 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CARD6Q9BX69 1037 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 POLR1EQ9GZS1 481 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 NACA2Q9H009 215 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 OSGEPL1Q9H4B0 414 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PLEKHA4Q9H4M7 779 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 FAM124BQ9H5Z6 455 aaPredicted RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 TLE6Q9H808 572 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 COQ10BQ9H8M1 238 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 RPF1Q9H9Y2 349 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 MAGEE1Q9HCI5 957 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 MRPL17Q9NRX2 175 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 PANK4Q9NVE7 773 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.37□□□□□ -1.87
CDC27-213ENST00000571643 RMND1Q9NWS8 449 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SOHLH2Q9NX45 425 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 RAB20Q9NX57 234 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ARHGEF38Q9NXL2 777 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 MPP6Q9NZW5 540 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 CNIH4Q9P003 139 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ANKMY1Q9P2S6 941 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 BAIAP2L1Q9UHR4 511 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 ADAM28Q9UKQ2 775 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 UBQLN1Q9UMX0 589 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 CDC14AQ9UNH5 594 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 SNX6Q9UNH7 406 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 TDRKHQ9Y2W6 561 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 PTRH2Q9Y3E5 179 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 NAALAD2Q9Y3Q0 740 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 GMEB1Q9Y692 573 aa3.37□□□□□ -1.87
CDC27-213ENST00000571643 PDCD11Q14690 1871 aaKnown RBP3.37□□□□□ -1.87
CDC27-213ENST00000571643 MTCL1Q9Y4B5 1905 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 COL4A4P53420 1690 aaPredicted RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 CHD7Q9P2D1 2997 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 PRRC2BQ5JSZ5 2229 aaKnown RBP3.36□□□□□ -1.87
CDC27-213ENST00000571643 TRIP11Q15643 1979 aa3.36□□□□□ -1.87
CDC27-213ENST00000571643 A0A087WWV3 80 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms