RNA–Protein interactions for RNA: ENST00000570904.5

LITAF-205, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-205ENST00000570904 VMP1Q96GC9 406 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 SERINC2Q96SA4 455 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 PHACTR1Q9C0D0 580 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 DAPP1Q9UN19 280 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 MRPS33Q9Y291 106 aaKnown RBP19.28■□□□□ 0.68
LITAF-205ENST00000570904 ZNF835Q9Y2P0 537 aa19.28■□□□□ 0.68
LITAF-205ENST00000570904 SUPT3HB4E1H0 165 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 CYR61O00622 381 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 ASNA1O43681 348 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 PRKNO60260 465 aaPredicted RBP19.27■□□□□ 0.68
LITAF-205ENST00000570904 SUPT3HO75486 399 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 PRF1P14222 555 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 HPDP32754 393 aaPredicted RBP19.27■□□□□ 0.68
LITAF-205ENST00000570904 MSH2P43246 934 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 ADORA2A-AS1P86434 159 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 CAV1Q03135 178 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 RPTNQ6XPR3 784 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 SYT10Q6XYQ8 523 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 LRRC70Q7Z2Q7 622 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 SREK1Q8WXA9 508 aaKnown RBP19.27■□□□□ 0.68
LITAF-205ENST00000570904 CD244Q9BZW8 370 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 RAB17Q9H0T7 212 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 PRM3Q9NNZ6 103 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 ADAP2Q9NPF8 381 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 NUDT4Q9NZJ9 180 aa19.27■□□□□ 0.68
LITAF-205ENST00000570904 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.27■□□□□ 0.68
LITAF-205ENST00000570904 UBXN8O00124 270 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 SH3BGRLO75368 114 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 ITGA10O75578 1167 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 ESRRAP11474 423 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 STX2P32856 288 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 RFC3P40938 356 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 MEOX1P50221 254 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 GPR143P51810 404 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 TGM3Q08188 693 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 LAPTM5Q13571 262 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 HIST2H2ACQ16777 129 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 PAGE2BQ5JRK9 111 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 HIST2H2AA3Q6FI13 130 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 ZNF793Q6ZN11 406 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 C16orf47Q6ZP98 133 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 Q6ZPB1 254 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 UBE3DQ7Z6J8 389 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 ISCA2Q86U28 154 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 CYP4Z2PQ8N1L4 340 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 GHDCQ8N2G8 530 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 TMEM156Q8N614 296 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 STAG3L4Q8TBR4 150 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 ATOH8Q96SQ7 321 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 MS4A8Q9BY19 250 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 PRDM7Q9NQW5 492 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 IGSF5Q9NSI5 407 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 PPIEQ9UNP9 301 aaKnown RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 KLF13Q9Y2Y9 288 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 KLF2Q9Y5W3 355 aaPredicted RBP19.26■□□□□ 0.67
LITAF-205ENST00000570904 ABCA12Q86UK0 2595 aa19.26■□□□□ 0.67
LITAF-205ENST00000570904 PCNX1Q96RV3 2341 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 RTCAO00442 366 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 KERAO60938 352 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 IFNA16P05015 189 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 PCNAP12004 261 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 ABOP16442 354 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 ETF1P62495 437 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 TBCCQ15814 346 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 BNC2Q6ZN30 1099 aaPredicted RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 NCCRP1Q6ZVX7 275 aaPredicted RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 TBC1D1Q86TI0 1168 aaPredicted RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 SULF2Q8IWU5 870 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 CHERPQ8IWX8 916 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 SRRM1Q8IYB3 904 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 ZNF473Q8WTR7 871 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 KCNC2Q96PR1 638 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 MAPKAP1Q9BPZ7 522 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 CCDC77Q9BR77 488 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 LIN28AQ9H9Z2 209 aaKnown RBP19.25■□□□□ 0.67
LITAF-205ENST00000570904 NMRAL1Q9HBL8 299 aa19.25■□□□□ 0.67
LITAF-205ENST00000570904 ESYT3A0FGR9 886 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 LTA4HP09960 611 aaKnown RBP19.24■□□□□ 0.67
LITAF-205ENST00000570904 HTR1EP28566 365 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 CRABP2P29373 138 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 PTGER1P34995 402 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 CASP2P42575 452 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 GPR85P60893 370 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 NAB1Q13506 487 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 BMPR2Q13873 1038 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 RCN2Q14257 317 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 ELAVL1Q15717 326 aaKnown RBP19.24■□□□□ 0.67
LITAF-205ENST00000570904 MDGA2Q7Z553 956 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 UBTD2Q8WUN7 234 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 NXNL1Q96CM4 212 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 MRRFQ96E11 262 aaKnown RBP19.24■□□□□ 0.67
LITAF-205ENST00000570904 KCMF1Q9P0J7 381 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 OPTCQ9UBM4 332 aa19.24■□□□□ 0.67
LITAF-205ENST00000570904 TMEM200CA6NKL6 621 aa19.23■□□□□ 0.67
LITAF-205ENST00000570904 K7EPI3 171 aa19.23■□□□□ 0.67
LITAF-205ENST00000570904 TFECO14948 347 aaPredicted RBP19.23■□□□□ 0.67
LITAF-205ENST00000570904 PEX1O43933 1283 aa19.23■□□□□ 0.67
LITAF-205ENST00000570904 CTNSO60931 367 aa19.23■□□□□ 0.67
LITAF-205ENST00000570904 LDB3O75112 727 aa19.23■□□□□ 0.67
LITAF-205ENST00000570904 ZFAND5O76080 213 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms