RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 OCA2Q04671 838 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 KLC1Q07866 573 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 SLAMF1Q13291 335 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 IL10RAQ13651 578 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 ERV3-1Q14264 604 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 IMPG1Q17R60 797 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 GALNT18Q6P9A2 607 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 SHISA6Q6ZSJ9 500 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 DDIASQ8IXT1 998 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 PRSS58Q8IYP2 241 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 TMEM52Q8NDY8 209 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 FAM76AQ8TAV0 307 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 STARD8Q92502 1023 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 TBC1D20Q96BZ9 403 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 MIEF2Q96C03 454 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 C19orf60Q96EN9 201 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 OR1F2PQ96R84 312 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 YIPF2Q9BWQ6 316 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 NMRK1Q9NWW6 199 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 AHSPQ9NZD4 102 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 MARCOQ9UEW3 520 aaPredicted RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 GIMAP2Q9UG22 337 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 NXT1Q9UKK6 140 aaKnown RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 PTRH2Q9Y3E5 179 aaKnown RBP16.97■□□□□ 0.31
COMMD4-222ENST00000568034 ASB4Q9Y574 426 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 PCSK5Q92824 1860 aa16.97■□□□□ 0.31
COMMD4-222ENST00000568034 PTPRQQ9UMZ3 2332 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 OR2W5A6NFC9 320 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 FAM227AF5H4B4 570 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 RRP8O43159 456 aaKnown RBP16.96■□□□□ 0.31
COMMD4-222ENST00000568034 RGS14O43566 566 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 RECKO95980 971 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 KLK1P06870 262 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 FHP07954 510 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 RNH1P13489 461 aaKnown RBP16.96■□□□□ 0.31
COMMD4-222ENST00000568034 IL10P22301 178 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 SPIN4Q56A73 249 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 MAVSQ7Z434 540 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 KIRREL3Q8IZU9 778 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 ADAMTS17Q8TE56 1095 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 FCRL1Q96LA6 429 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 MESP1Q9BRJ9 268 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 EFHD1Q9BUP0 239 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 WDR70Q9NW82 654 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 MCM8Q9UJA3 840 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 FBXW2Q9UKT8 454 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 ZMIZ1Q9ULJ6 1067 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 PADI2Q9Y2J8 665 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 ATG4BQ9Y4P1 393 aa16.96■□□□□ 0.31
COMMD4-222ENST00000568034 ATP6AP2A0A1C7CYW4 349 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 ZNF195O14628 629 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CREG1O75629 220 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 ATP6AP2O75787 350 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CDC123O75794 336 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CD63P08962 238 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 FAM58BPP0C7Q3 252 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 TIA1P31483 386 aaKnown RBP eCLIP16.95■□□□□ 0.3
COMMD4-222ENST00000568034 FOLR3P41439 243 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 HK2P52789 917 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 RHAGQ02094 409 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 GUCY1A3Q02108 690 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 ACSM2AQ08AH3 577 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 NR6A1Q15406 480 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 TUBB8Q3ZCM7 444 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 ACSM2BQ68CK6 577 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 PAGE2Q7Z2X7 111 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 FAM47BQ8NA70 645 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 METTL2AQ96IZ6 378 aaKnown RBP16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CCT7Q99832 543 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 NUF2Q9BZD4 464 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 VN1R1Q9GZP7 353 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CCDC134Q9H6E4 229 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 LRTM1Q9HBL6 345 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 C1orf109Q9NX04 203 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 LYARQ9NX58 379 aaKnown RBP16.95■□□□□ 0.3
COMMD4-222ENST00000568034 TEX10Q9NXF1 929 aaPredicted RBP16.95■□□□□ 0.3
COMMD4-222ENST00000568034 CLDN16Q9Y5I7 305 aa16.95■□□□□ 0.3
COMMD4-222ENST00000568034 SCN2AQ99250 2005 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 A0A1W2PR48 441 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 IDSB3KWA1 339 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 HDAC3O15379 428 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 PCDH7O60245 1069 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 PRKRAO75569 313 aaKnown RBP16.94■□□□□ 0.3
COMMD4-222ENST00000568034 FURINP09958 794 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 PRR35P0CG20 571 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 KITP10721 976 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 TNFRSF17Q02223 184 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 RFTN2Q52LD8 501 aaPredicted RBP16.94■□□□□ 0.3
COMMD4-222ENST00000568034 SPDYAQ5MJ70 313 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 CCNYL2Q5T2Q4 361 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 CYP20A1Q6UW02 462 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 LRRC69Q6ZNQ3 347 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 FAM47EQ6ZV65 393 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 GPR180Q86V85 440 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 CRLF3Q8IUI8 442 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 WDR75Q8IWA0 830 aaKnown RBP16.94■□□□□ 0.3
COMMD4-222ENST00000568034 SCUBE1Q8IWY4 988 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 EFCAB3Q8N7B9 438 aa16.94■□□□□ 0.3
COMMD4-222ENST00000568034 PIWIL2Q8TC59 973 aaKnown RBP16.94■□□□□ 0.3
COMMD4-222ENST00000568034 ADAMTS18Q8TE60 1221 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms