RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PPP1R36Q96LQ0 422 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PPP3R2Q96LZ3 170 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CNBD2Q96M20 576 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 BBC3Q96PG8 261 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZBTB18Q99592 522 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 HGH1Q9BTY7 390 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SCNM1Q9BWG6 230 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 PRDM13Q9H4Q3 707 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 CLK4Q9HAZ1 481 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 MAGEE1Q9HCI5 957 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 TRPV5Q9NQA5 729 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 MARCH5Q9NX47 278 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 MARCH4Q9P2E8 410 aaPredicted RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 MTRRQ9UBK8 725 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 GNPTGQ9UJJ9 305 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 G3BP2Q9UN86 482 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF510Q9Y2H8 683 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 FIS1Q9Y3D6 152 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RAI2Q9Y5P3 530 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 ARL5AQ9Y689 179 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 COX11Q9Y6N1 276 aa5.1□□□□□ -1.59
CAPN3-217ENST00000567817 SMG1Q96Q15 3661 aaKnown RBP5.1□□□□□ -1.59
CAPN3-217ENST00000567817 RALGAPA1Q6GYQ0 2036 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 H0YAE9 185 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 H3BUI4 141 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SLC28A1O00337 649 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RGS14O43566 566 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TRIAP1O43715 76 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ECI2O75521 394 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SORBS2O94875 1100 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TMCC1O94876 653 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 BMP10O95393 424 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HPRP00739 348 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 LDLRP01130 860 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SLC4A1P02730 911 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TFAP2AP05549 437 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 GALTP07902 379 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HNRNPA1P09651 372 aaKnown RBP eCLIP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ALDOCP09972 364 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CBSLP0DN79 551 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CHRM3P20309 590 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 MYF6P23409 242 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 JAK1P23458 1154 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 DGKAP23743 735 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 NFKBIAP25963 317 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HOXA9P31269 272 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 FMO4P31512 558 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CBSP35520 551 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 GRIA3P42263 894 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 PGFP49763 221 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ERFP50548 548 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RPS6KA3P51812 740 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 POLR2JP52435 117 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ELLP55199 621 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CDH13P55290 713 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 NXPH1P58417 271 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 EMX2Q04743 252 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF33BQ06732 778 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 OR4D1Q15615 310 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 LPAL2Q16609 132 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 PPP1R3AQ16821 1122 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SLC5A9Q2M3M2 681 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 NHSL2Q5HYW2 709 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 MPP7Q5T2T1 576 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ARMC12Q5T9G4 340 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CLEC6AQ6EIG7 209 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 NCEH1Q6PIU2 408 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TSSK4Q6SA08 328 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CYHR1Q6ZMK1 362 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RD3Q7Z3Z2 195 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ITIH5Q86UX2 942 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 PIM3Q86V86 326 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ZFAND4Q86XD8 727 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CROCCP3Q8IVE0 287 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 FUNDC1Q8IVP5 155 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SLC15A3Q8IY34 581 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 RBFAQ8N0V3 343 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 MYO1HQ8N1T3 1032 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TRIML2Q8N7C3 387 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 LPCAT1Q8NF37 534 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TOR1AIP2Q8NFQ8 470 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 TSPAN14Q8NG11 270 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 OR4K2Q8NGD2 314 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 OR13C4Q8NGS5 318 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 ZNF420Q8TAQ5 688 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HMGCLL1Q8TB92 370 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 UBTD2Q8WUN7 234 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 JPH3Q8WXH2 748 aaPredicted RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 SDCCAG3Q96C92 435 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 LINGO1Q96FE5 620 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 FBXL20Q96IG2 436 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 HIC2Q96JB3 615 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CNDP2Q96KP4 475 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 MARK4Q96L34 752 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 CCDC115Q96NT0 180 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 BIRC8Q96P09 236 aa5.09□□□□□ -1.59
CAPN3-217ENST00000567817 PRPF18Q99633 342 aaKnown RBP5.09□□□□□ -1.59
CAPN3-217ENST00000567817 GPR21Q99679 349 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms