RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-213ENST00000567737 CAMK2AQ9UQM7 478 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 MMACHCQ9Y4U1 282 aa12.66□□□□□ -0.38
SMG1-213ENST00000567737 CD8B2A6NJW9 211 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 KCNAB3O43448 404 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 CEP104O60308 925 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 ZNF189O75820 626 aaPredicted RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 METTL18O95568 372 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 B3GALT4O96024 378 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 CHRM3P20309 590 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 HK2P52789 917 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 KCNJ2P63252 427 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 CRYZQ08257 329 aaKnown RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 CDH17Q12864 832 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 DUSP8Q13202 625 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 BMPR2Q13873 1038 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 P3H1Q32P28 736 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 HSDL2Q6YN16 418 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 KATNAL2Q8IYT4 538 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 LRRC25Q8N386 305 aaPredicted RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 SREK1Q8WXA9 508 aaKnown RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 FAM136AQ96C01 138 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 ZNF778Q96MU6 729 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 TIMP4Q99727 224 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 FAM118BQ9BPY3 351 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 PRDM14Q9GZV8 571 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 CLK4Q9HAZ1 481 aaKnown RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 LRTM1Q9HBL6 345 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 ZFP64Q9NPA5 681 aa12.65□□□□□ -0.38
SMG1-213ENST00000567737 ZNF701Q9NV72 531 aaPredicted RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 MARCH4Q9P2E8 410 aaPredicted RBP12.65□□□□□ -0.38
SMG1-213ENST00000567737 KIAA1549Q9HCM3 1950 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 CD3EAPO15446 510 aaKnown RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 TMCC2O75069 709 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 SERPIND1P05546 499 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 ZNF888P0CJ79 500 aaPredicted RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 ADRA1DP25100 572 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 MC3RP41968 323 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 TBL3Q12788 808 aaKnown RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 KCNJ11Q14654 390 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 RPS6KA1Q15418 735 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 ACSBG2Q5FVE4 666 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 CTSL3PQ5NE16 218 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 PPHLN1Q8NEY8 458 aaKnown RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 ZBED6CLQ96FA7 236 aaPredicted RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 JSRP1Q96MG2 331 aaPredicted RBP12.64□□□□□ -0.39
SMG1-213ENST00000567737 SFXN3Q9BWM7 321 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 PLA2G12AQ9BZM1 189 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 PCBD2Q9H0N5 130 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 ALG2Q9H553 416 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 KLHL28Q9NXS3 571 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 CAPN11Q9UMQ6 739 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 DSCAMO60469 2012 aa12.64□□□□□ -0.39
SMG1-213ENST00000567737 H3BMM5 538 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 NIPSNAP2O75323 286 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 CRYGSP22914 178 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 IMPA1P29218 277 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 PPP2R1BP30154 601 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 FMO4P31512 558 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 CPOXP36551 454 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 DIO3P55073 304 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 TBPL1P62380 186 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 RGS1Q08116 209 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 PWP1Q13610 501 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 RCAN2Q14206 197 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 NR1I3Q14994 352 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 SLC22A10Q63ZE4 541 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 RBM43Q6ZSC3 357 aaKnown RBP12.63□□□□□ -0.39
SMG1-213ENST00000567737 SYDE1Q6ZW31 735 aaPredicted RBP12.63□□□□□ -0.39
SMG1-213ENST00000567737 BTLAQ7Z6A9 289 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 C17orf64Q86WR6 236 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 MPP5Q8N3R9 675 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 TMEM132CQ8N3T6 1108 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 OTUD6BQ8N6M0 293 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 WFIKKN1Q96NZ8 548 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 MED18Q9BUE0 208 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 PIGMQ9H3S5 423 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 ADAP2Q9NPF8 381 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 ZNF148Q9UQR1 794 aa12.63□□□□□ -0.39
SMG1-213ENST00000567737 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMG1-213ENST00000567737 SERPINC1P01008 464 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 GDF1P27539 372 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 FOXF2Q12947 444 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 ETFDHQ16134 617 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 BBS9Q3SYG4 887 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 PRAMEF20Q5VT98 475 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 PPP1R21Q6ZMI0 780 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 REXO1L1PQ8IX06 675 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 C9orf106Q8NAJ2 232 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 OR5L2Q8NGL0 311 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 IGFBPL1Q8WX77 278 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 ROBO4Q8WZ75 1007 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 PEX13Q92968 403 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 BEX2Q9BXY8 128 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 SH2B3Q9UQQ2 575 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 CLCA3PQ9Y6N3 262 aa12.62□□□□□ -0.39
SMG1-213ENST00000567737 EML6Q6ZMW3 1958 aa12.61□□□□□ -0.39
SMG1-213ENST00000567737 URADA6NGE7 173 aa12.61□□□□□ -0.39
SMG1-213ENST00000567737 LRRC3CA6NJW4 275 aa12.61□□□□□ -0.39
SMG1-213ENST00000567737 E5RI56 91 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms