RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 KERAO60938 352 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 FAM155BO75949 473 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 LTA4HP09960 611 aaKnown RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 ZNF24P17028 368 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 EPORP19235 508 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 CD22P20273 847 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 HNRNPFP52597 415 aaKnown RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 E2F2Q14209 437 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 ELAVL1Q15717 326 aaKnown RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 ADNP2Q6IQ32 1131 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 Q6ZPB1 254 aaPredicted RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 CMC1Q7Z7K0 106 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 SPPL2CQ8IUH8 684 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 SIAH3Q8IW03 269 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 TMEM132CQ8N3T6 1108 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 POGLUT1Q8NBL1 392 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 TMEM52Q8NDY8 209 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 UBTD2Q8WUN7 234 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 TSPAN10Q9H1Z9 355 aaPredicted RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 LYRM4Q9HD34 91 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 PRM3Q9NNZ6 103 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 KLF13Q9Y2Y9 288 aaPredicted RBP18.82■□□□□ 0.6
CLN6-207ENST00000566347 CLDN16Q9Y5I7 305 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 CREBBPQ92793 2442 aa18.82■□□□□ 0.6
CLN6-207ENST00000566347 SUPT3HB4E1H0 165 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 TGFBR3LH3BV60 316 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ASNA1O43681 348 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 CTNSO60931 367 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 SUPT3HO75486 399 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 WISP2O76076 250 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ESRRAP11474 423 aaPredicted RBP18.81■□□□□ 0.6
CLN6-207ENST00000566347 SERPINB1P30740 379 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 MSH2P43246 934 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 DLG1Q12959 904 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 C3AR1Q16581 482 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 TMEM35AQ53FP2 167 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 SP5Q6BEB4 398 aaPredicted RBP18.81■□□□□ 0.6
CLN6-207ENST00000566347 MRGPRGQ86SM5 289 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ZNF227Q86WZ6 799 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 TICAM1Q8IUC6 712 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 GHDCQ8N2G8 530 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 TMEM156Q8N614 296 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 NCLNQ969V3 563 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 F2RL3Q96RI0 385 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ATOH8Q96SQ7 321 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 CSF3RQ99062 836 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 TBCDQ9BTW9 1192 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 PRDM7Q9NQW5 492 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 IGSF5Q9NSI5 407 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 OPTCQ9UBM4 332 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ACOT9Q9Y305 439 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 ASB1Q9Y576 335 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 SPACA6W5XKT8 324 aa18.81■□□□□ 0.6
CLN6-207ENST00000566347 CCDC189A1A4V9 331 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 SYCE1LA8MT33 242 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 KLRC4-KLRK1H3BQV0 150 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 K7EPI3 171 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 ITGA10O75578 1167 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 ZFAND5O76080 213 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 IFNA16P05015 189 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 PPP2R1BP30154 601 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 GPR143P51810 404 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 GUCY2DQ02846 1103 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 CKAP4Q07065 602 aaKnown RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 PCDH1Q08174 1060 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 TRADDQ15628 312 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 MED27Q6P2C8 311 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 CHSY3Q70JA7 882 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 CLNKQ7Z7G1 428 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 LURAP1LQ8IV03 231 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 LAS2Q8IYD9 372 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 CYP4Z2PQ8N1L4 340 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 C17orf53Q8N3J3 647 aaPredicted RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 CPSF7Q8N684 471 aaKnown RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 C7orf57Q8NEG2 295 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 ZNF473Q8WTR7 871 aaKnown RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 DAZLQ92904 295 aaKnown RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 MARVELD3Q96A59 401 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 MS4A8Q9BY19 250 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 RUBCNLQ9H714 662 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 TINAGQ9UJW2 476 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 ZNF223Q9UK11 482 aaPredicted RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 YARS2Q9Y2Z4 477 aaKnown RBP18.8■□□□□ 0.6
CLN6-207ENST00000566347 CLCA3PQ9Y6N3 262 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 PCNX1Q96RV3 2341 aa18.8■□□□□ 0.6
CLN6-207ENST00000566347 LRBAP50851 2863 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 A0A087X1B8 175 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 ARHGAP10A1A4S6 786 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 UBXN8O00124 270 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 EPB42P16452 691 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 GMPRP36959 345 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 SSR4P51571 173 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 SMSP52788 366 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 STX4Q12846 297 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 BMPR2Q13873 1038 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 SERTAD2Q14140 314 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 FAM83EQ2M2I3 478 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 XKRXQ6PP77 449 aa18.79■□□□□ 0.6
CLN6-207ENST00000566347 BNC2Q6ZN30 1099 aaPredicted RBP18.79■□□□□ 0.6
CLN6-207ENST00000566347 UBE3DQ7Z6J8 389 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms