RNA–Protein interactions for RNA: ENST00000566087.5

NSMCE1-211, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 5

Gene NSMCE1, Length 878 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-211ENST00000566087 LIPJQ5W064 366 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 MED27Q6P2C8 311 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 TRIM40Q6P9F5 258 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 COX15Q7KZN9 410 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 PPP1R32Q7Z5V6 425 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 PIGWQ7Z7B1 504 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 CRLF3Q8IUI8 442 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 CCNYL1Q8N7R7 359 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 PTGR2Q8N8N7 351 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 AMER3Q8N944 861 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 KCT2Q8NC54 265 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 ZCCHC10Q8TBK6 192 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 ADAMTS18Q8TE60 1221 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 CCT6BQ92526 530 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 ATP6V1E2Q96A05 226 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 PHF21BQ96EK2 531 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 WDR34Q96EX3 536 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 AGAP4Q96P64 663 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 NPLQ9BXD5 320 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 ERVK-6Q9BXR3 956 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 COPS7BQ9H9Q2 264 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 RIC8BQ9NVN3 520 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 TEKT2Q9UIF3 430 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 SH2B3Q9UQQ2 575 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 MRPS33Q9Y291 106 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 NAALAD2Q9Y3Q0 740 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 PCDHGA11Q9Y5H2 935 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 SPACA6W5XKT8 324 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 ESPL1Q14674 2120 aa10.09□□□□□ -0.79
NSMCE1-211ENST00000566087 A6NL46 340 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SGK494L7N484 410 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 CLDN4O14493 209 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 P2RX6O15547 441 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ITM2AO43736 263 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 GALR3O60755 368 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 CNOT3O75175 753 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ALOX12BO75342 701 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 WFS1O76024 890 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 HSPA4LO95757 839 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 RNH1P13489 461 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 IL1RNP18510 177 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ITGA3P26006 1051 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 GALNT1Q10472 559 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 DOC2AQ14183 400 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SETDB1Q15047 1291 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 PCBP2Q15366 365 aaKnown RBP eCLIP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 DEFB134Q4QY38 66 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TMEM35AQ53FP2 167 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 FAM69BQ5VUD6 431 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 CES4AQ5XG92 561 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 JMJD6Q6NYC1 403 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 KIRREL2Q6UWL6 708 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 RIPOR1Q6ZS17 1223 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SHISA6Q6ZSJ9 500 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 MAMDC2Q7Z304 686 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SPATA21Q7Z572 469 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 HOMEZQ8IX15 550 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 KBTBD2Q8IY47 623 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 PRSS58Q8IYP2 241 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ZADH2Q8N4Q0 377 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ARHGEF39Q8N4T4 335 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 AFAP1L2Q8N4X5 818 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TEX9Q8N6V9 391 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 Q8NA96 180 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ZNF740Q8NDX6 193 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 OR11G2Q8NGC1 345 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 UTP15Q8TED0 518 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 UBTD2Q8WUN7 234 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 GAL3ST3Q96A11 431 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TBC1D20Q96BZ9 403 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TMEM237Q96Q45 408 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 LMF1Q96S06 567 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SMAD5Q99717 465 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TRMOQ9BU70 441 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 TUBB6Q9BUF5 446 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 C1QTNF3Q9BXJ4 246 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 SLC6A16Q9GZN6 736 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 C20orf27Q9GZN8 174 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 LHPPQ9H008 270 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ILKAPQ9H0C8 392 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 RHBGQ9H310 441 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ZNF395Q9H8N7 513 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ACTR8Q9H981 624 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 EML4Q9HC35 981 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 ERRFI1Q9UJM3 462 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 FBXL4Q9UKA2 621 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 HS3ST3B1Q9Y662 390 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 LRBAP50851 2863 aa10.08□□□□□ -0.8
NSMCE1-211ENST00000566087 CCDC88CQ9P219 2028 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 MED13Q9UHV7 2174 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 LRIT2A6NDA9 550 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 SOCS6O14544 535 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 B3GALT2O43825 422 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 SNX3O60493 162 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 PRMT3O60678 531 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 LYPLA1O75608 230 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 SUPT7LO94864 414 aa10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 ZNF888P0CJ79 500 aaPredicted RBP10.07□□□□□ -0.8
NSMCE1-211ENST00000566087 PTX3P26022 381 aaPredicted RBP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms