RNA–Protein interactions for RNA: ENST00000564628.1

NME3-207, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-207ENST00000564628 BRIX1Q8TDN6 353 aaKnown RBP17.79■□□□□ 0.44
NME3-207ENST00000564628 ITLN2Q8WWU7 325 aaPredicted RBP17.79■□□□□ 0.44
NME3-207ENST00000564628 PGM2Q96G03 612 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 SH3GL2Q99962 352 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 C1QTNF3Q9BXJ4 246 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 RNF32Q9H0A6 362 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 KLHL31Q9H511 634 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 CLK4Q9HAZ1 481 aaKnown RBP17.79■□□□□ 0.44
NME3-207ENST00000564628 TMBIM4Q9HC24 238 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 SUCOQ9UBS9 1254 aaKnown RBP17.79■□□□□ 0.44
NME3-207ENST00000564628 TSC22D4Q9Y3Q8 395 aa17.79■□□□□ 0.44
NME3-207ENST00000564628 A0A1W2PPM1 405 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 URADA6NGE7 173 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 A8MT66 165 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 IDSB3KWA1 339 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 GOLGA8RI6L899 631 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 RGS16O15492 202 aaPredicted RBP17.78■□□□□ 0.44
NME3-207ENST00000564628 UGDHO60701 494 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 CYC1P08574 325 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 RPS17P08708 135 aaKnown RBP17.78■□□□□ 0.44
NME3-207ENST00000564628 EEF1DP29692 281 aaKnown RBP17.78■□□□□ 0.44
NME3-207ENST00000564628 HNRNPH1P31943 449 aaKnown RBP17.78■□□□□ 0.44
NME3-207ENST00000564628 PTGER4P35408 488 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 EMP2P54851 167 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 STXBP1P61764 594 aaKnown RBP17.78■□□□□ 0.44
NME3-207ENST00000564628 AP2B1P63010 937 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 SKP1P63208 163 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 DEFB134Q4QY38 66 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 TOR1AIP1Q5JTV8 583 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 MTFR2Q6P444 385 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 OR51Q1Q8NH59 317 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 DNAJB8Q8NHS0 232 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 UBE2E3Q969T4 207 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 GAL3ST3Q96A11 431 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 MS4A6EQ96DS6 147 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 PHF21BQ96EK2 531 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 CENPHQ9H3R5 247 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 RIC8BQ9NVN3 520 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 PLA2G3Q9NZ20 509 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 HCN3Q9P1Z3 774 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 ABI3Q9P2A4 366 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 PCTPQ9UKL6 214 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 ANGPTL3Q9Y5C1 460 aa17.78■□□□□ 0.44
NME3-207ENST00000564628 PDZD2O15018 2839 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 IGHV1-45A0A0A0MS14 117 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 ZNF860A6NHJ4 632 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 ANKDD1BA6NHY2 528 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 FOXO6A8MYZ6 492 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 B3GALT4O96024 378 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 CRYABP02511 175 aaKnown RBP17.77■□□□□ 0.44
NME3-207ENST00000564628 HNF4AP41235 474 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 XCR1P46094 333 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 HIST2H2ACQ16777 129 aaPredicted RBP17.77■□□□□ 0.44
NME3-207ENST00000564628 AGBL2Q5U5Z8 902 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 LIPJQ5W064 366 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 HIST2H2AA3Q6FI13 130 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 MED27Q6P2C8 311 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 BNC2Q6ZN30 1099 aaPredicted RBP17.77■□□□□ 0.44
NME3-207ENST00000564628 ZNF808Q8N4W9 903 aaPredicted RBP17.77■□□□□ 0.44
NME3-207ENST00000564628 L3MBTL4Q8NA19 623 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 OR7G3Q8NG95 312 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 OR5T3Q8NGG3 340 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 ZNF473Q8WTR7 871 aaKnown RBP17.77■□□□□ 0.44
NME3-207ENST00000564628 YIPF2Q9BWQ6 316 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 IPPKQ9H8X2 491 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 CHST11Q9NPF2 352 aa17.77■□□□□ 0.44
NME3-207ENST00000564628 FBN2P35556 2912 aa17.77■□□□□ 0.43
NME3-207ENST00000564628 SMIM23A6NLE4 172 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 OR7A17O14581 309 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 DNAJB6O75190 326 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 IL10P22301 178 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 GRNP28799 593 aaKnown RBP17.76■□□□□ 0.43
NME3-207ENST00000564628 SERPINB1P30740 379 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 RIPPLY3P57055 190 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 RAB8AP61006 207 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 TMEM205Q6UW68 189 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 RPTNQ6XPR3 784 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 GDF7Q7Z4P5 450 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 SIRT6Q8N6T7 355 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 OR2L5Q8NG80 312 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 ZNF483Q8TF39 744 aaPredicted RBP17.76■□□□□ 0.43
NME3-207ENST00000564628 CCDC120Q96HB5 630 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 QRFPRQ96P65 431 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 OR1F2PQ96R84 312 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 MS4A8Q9BY19 250 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 VN1R1Q9GZP7 353 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.76■□□□□ 0.43
NME3-207ENST00000564628 ACTR8Q9H981 624 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 ZBTB26Q9HCK0 441 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 LANCL2Q9NS86 450 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 DCDC2Q9UHG0 476 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 LGALS13Q9UHV8 139 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 EMCNQ9ULC0 261 aa17.76■□□□□ 0.43
NME3-207ENST00000564628 CPAMD8Q8IZJ3 1885 aa17.75■□□□□ 0.43
NME3-207ENST00000564628 LOC102723996A0A087X1L8 192 aa17.75■□□□□ 0.43
NME3-207ENST00000564628 TRGV8A0A0C4DH27 118 aa17.75■□□□□ 0.43
NME3-207ENST00000564628 HMGB1P1B2RPK0 211 aaPredicted RBP17.75■□□□□ 0.43
NME3-207ENST00000564628 H0YIV9 168 aa17.75■□□□□ 0.43
NME3-207ENST00000564628 ERI3O43414 337 aaKnown RBP17.75■□□□□ 0.43
NME3-207ENST00000564628 DLX3O60479 287 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms