RNA–Protein interactions for RNA: ENST00000564409.1

SPG7-210, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 717 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-210ENST00000564409 NUDT4Q9NZJ9 180 aa14□□□□□ -0.17
SPG7-210ENST00000564409 SPACA6W5XKT8 324 aa14□□□□□ -0.17
SPG7-210ENST00000564409 PKDREJQ9NTG1 2253 aa14□□□□□ -0.17
SPG7-210ENST00000564409 CACNA1CQ13936 2221 aa14□□□□□ -0.17
SPG7-210ENST00000564409 TRBV11-1A0A0K0K1C0 115 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 A8MUA0 341 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CYR61O00622 381 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 PIAS1O75925 651 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 TBX6O95947 436 aaPredicted RBP13.99□□□□□ -0.17
SPG7-210ENST00000564409 C1QAP02745 245 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 ABOP16442 354 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CASQ1P31415 396 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 PTGER4P35408 488 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 MAGEA4P43358 317 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 GPR143P51810 404 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 PLTPP55058 493 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 LIM2P55344 173 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 GPX6P59796 221 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CHIT1Q13231 466 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 BIKQ13323 160 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 SERTAD2Q14140 314 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 C3AR1Q16581 482 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 ZNF630Q2M218 657 aaPredicted RBP13.99□□□□□ -0.17
SPG7-210ENST00000564409 KBTBD12Q3ZCT8 623 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CHSY3Q70JA7 882 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 VN1R5Q7Z5H4 357 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 TBC1D1Q86TI0 1168 aaPredicted RBP13.99□□□□□ -0.17
SPG7-210ENST00000564409 ISCA2Q86U28 154 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 ZNF227Q86WZ6 799 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CYP4Z2PQ8N1L4 340 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 SPATA6LQ8N4H0 392 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 MORN4Q8NDC4 146 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 OR8K3Q8NH51 312 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 OR14A16Q8NHC5 309 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 PHF10Q8WUB8 498 aaKnown RBP13.99□□□□□ -0.17
SPG7-210ENST00000564409 UBTD2Q8WUN7 234 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 TIMMDC1Q9NPL8 285 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 PRDM7Q9NQW5 492 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 RYDENQ9NUL5 291 aaKnown RBP13.99□□□□□ -0.17
SPG7-210ENST00000564409 VTI1BQ9UEU0 232 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 FBXW2Q9UKT8 454 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 MEMO1Q9Y316 297 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CLDN16Q9Y5I7 305 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 CLCA3PQ9Y6N3 262 aa13.99□□□□□ -0.17
SPG7-210ENST00000564409 A0A0G2JN53 185 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 ARHGAP10A1A4S6 786 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 SYCE1LA8MT33 242 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 E9PLN8 166 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 PRRG2O14669 202 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 CCNT2O60583 730 aaKnown RBP13.98□□□□□ -0.17
SPG7-210ENST00000564409 PRAMEF4O60810 478 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 KERAO60938 352 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 ITGA10O75578 1167 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 LTA4HP09960 611 aaKnown RBP13.98□□□□□ -0.17
SPG7-210ENST00000564409 HTR1EP28566 365 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 SSR4P51571 173 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 ARFIP1P53367 373 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 ETF1P62495 437 aaKnown RBP13.98□□□□□ -0.17
SPG7-210ENST00000564409 STX4Q12846 297 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 PRAMEF9Q5VWM5 478 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 MED27Q6P2C8 311 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 RAPH1Q70E73 1250 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 LAS2Q8IYD9 372 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 CPSF7Q8N684 471 aaKnown RBP13.98□□□□□ -0.17
SPG7-210ENST00000564409 PPM1NQ8N819 430 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 C16orf52Q8NHV5 167 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 RHEBL1Q8TAI7 183 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 NCLNQ969V3 563 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 VKORC1Q9BQB6 163 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 UNKQ9C0B0 810 aaKnown RBP13.98□□□□□ -0.17
SPG7-210ENST00000564409 OPTCQ9UBM4 332 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 SH3BGRL2Q9UJC5 107 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 TINAGQ9UJW2 476 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 ACOT9Q9Y305 439 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 TSC22D4Q9Y3Q8 395 aa13.98□□□□□ -0.17
SPG7-210ENST00000564409 K7EPI3 171 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 TFECO14948 347 aaPredicted RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 SCELO95171 688 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 TUBB4AP04350 444 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 IFNA16P05015 189 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 SLC35E2BP0CK96 405 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 CD22P20273 847 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 CERS1P27544 350 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 MSH2P43246 934 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 MRPS25P82663 173 aaKnown RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 ADORA2A-AS1P86434 159 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 C2orf54Q08AI8 447 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 BMPR2Q13873 1038 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 AP5B1Q2VPB7 878 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 HSDL2Q6YN16 418 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 ZNF572Q7Z3I7 529 aaPredicted RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 SULF2Q8IWU5 870 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 FAM47BQ8NA70 645 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 ZFP62Q8NB50 900 aaPredicted RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 FBXO25Q8TCJ0 367 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 ZNF473Q8WTR7 871 aaKnown RBP13.97□□□□□ -0.17
SPG7-210ENST00000564409 CMTM7Q96FZ5 175 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 F2RL3Q96RI0 385 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 ATOH8Q96SQ7 321 aa13.97□□□□□ -0.17
SPG7-210ENST00000564409 CENPKQ9BS16 269 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms