RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 PNO1Q9NRX1 252 aaKnown RBP28.8■■■□□ 2.2
CMTM4-204ENST00000563952 TRAV17A0A0B4J275 112 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 IQANK1A0A1B0GTG1 560 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 CYR61O00622 381 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 PIK3CBP42338 1070 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 RAP1GDS1P52306 607 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 PHEXP78562 749 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 DEPDC1Q5TB30 811 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 ZNF595Q8IYB9 648 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 SLC5A8Q8N695 610 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 NSUN5Q96P11 429 aaKnown RBP28.79■■■□□ 2.2
CMTM4-204ENST00000563952 SORBS1Q9BX66 1292 aaKnown RBP28.79■■■□□ 2.2
CMTM4-204ENST00000563952 LYRM4Q9HD34 91 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 AGPAT4Q9NRZ5 378 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 PSMC3IPQ9P2W1 217 aaPredicted RBP28.79■■■□□ 2.2
CMTM4-204ENST00000563952 PCTPQ9UKL6 214 aa28.79■■■□□ 2.2
CMTM4-204ENST00000563952 OR5H15A6NDH6 313 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 H0YIV9 168 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 TGFBR3LH3BV60 316 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 OR7A17O14581 309 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 CLDN9O95484 217 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 HIST1H1TP22492 207 aaPredicted RBP28.78■■■□□ 2.2
CMTM4-204ENST00000563952 ST13P50502 369 aaKnown RBP28.78■■■□□ 2.2
CMTM4-204ENST00000563952 CCNG1P51959 295 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 RPS13P62277 151 aaKnown RBP28.78■■■□□ 2.2
CMTM4-204ENST00000563952 MEP1AQ16819 746 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 EIF1ADQ8N9N8 165 aaKnown RBP28.78■■■□□ 2.2
CMTM4-204ENST00000563952 L3MBTL4Q8NA19 623 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 OR52B6Q8NGF0 335 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 GRHL3Q8TE85 626 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 RGMAQ96B86 450 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 NPAS2Q99743 824 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 MAPKAP1Q9BPZ7 522 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 CCDC77Q9BR77 488 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 CENPKQ9BS16 269 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 KCMF1Q9P0J7 381 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 ABI3Q9P2A4 366 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 TBK1Q9UHD2 729 aa28.78■■■□□ 2.2
CMTM4-204ENST00000563952 PRRC2CQ9Y520 2896 aaKnown RBP28.78■■■□□ 2.2
CMTM4-204ENST00000563952 MAN1A2O60476 641 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 MYO1DO94832 1006 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 PPP2R1BP30154 601 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 UBAP2LQ14157 1087 aaKnown RBP28.77■■■□□ 2.2
CMTM4-204ENST00000563952 ZRSR2Q15696 482 aaKnown RBP28.77■■■□□ 2.2
CMTM4-204ENST00000563952 OR4C11Q6IEV9 310 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 SUN3Q8TAQ9 357 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 ELP5Q8TE02 316 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 UBLCP1Q8WVY7 318 aaPredicted RBP28.77■■■□□ 2.2
CMTM4-204ENST00000563952 SEMA4BQ9NPR2 832 aaPredicted RBP28.77■■■□□ 2.2
CMTM4-204ENST00000563952 FETUBQ9UGM5 382 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 FBXW2Q9UKT8 454 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 TSC22D4Q9Y3Q8 395 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 SPACA6W5XKT8 324 aa28.77■■■□□ 2.2
CMTM4-204ENST00000563952 GOLGA8RI6L899 631 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 SBK3P0C264 359 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 NEK2P51955 445 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 FAM180AQ6UWF9 173 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 RPS27LQ71UM5 84 aaKnown RBP28.76■■■□□ 2.19
CMTM4-204ENST00000563952 FAM26EQ8N5C1 309 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 NFAM1Q8NET5 270 aaPredicted RBP28.76■■■□□ 2.19
CMTM4-204ENST00000563952 CDCP1Q9H5V8 836 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 ANKRD10Q9NXR5 420 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 TMEM216Q9P0N5 145 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 CLDN16Q9Y5I7 305 aa28.76■■■□□ 2.19
CMTM4-204ENST00000563952 MYOCOSA0A1B0GUC4 107 aa28.75■■■□□ 2.19
CMTM4-204ENST00000563952 A8MT66 165 aa28.75■■■□□ 2.19
CMTM4-204ENST00000563952 PTX3P26022 381 aaPredicted RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 SRSF1Q07955 248 aaKnown RBP eCLIP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 EIF2S3LQ2VIR3 472 aaKnown RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 RPUSD3Q6P087 351 aaKnown RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 TMEM151AQ8N4L1 468 aa28.75■■■□□ 2.19
CMTM4-204ENST00000563952 MTFMTQ96DP5 389 aaKnown RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 BARD1Q99728 777 aaKnown RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 ZBTB26Q9HCK0 441 aa28.75■■■□□ 2.19
CMTM4-204ENST00000563952 FLNBO75369 2602 aaKnown RBP28.75■■■□□ 2.19
CMTM4-204ENST00000563952 FLNCQ14315 2725 aa28.75■■■□□ 2.19
CMTM4-204ENST00000563952 PLPP1O14494 284 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 CTNSO60931 367 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 SCELO95171 688 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 CBX6O95503 412 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 IFNA16P05015 189 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 RPS17P08708 135 aaKnown RBP28.74■■■□□ 2.19
CMTM4-204ENST00000563952 CPN2P22792 545 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 SLAMF1Q13291 335 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 TTC19Q6DKK2 380 aaPredicted RBP28.74■■■□□ 2.19
CMTM4-204ENST00000563952 PRR7Q8TB68 274 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 WDR20Q8TBZ3 569 aa28.74■■■□□ 2.19
CMTM4-204ENST00000563952 UTP23Q9BRU9 249 aaKnown RBP28.74■■■□□ 2.19
CMTM4-204ENST00000563952 RELNP78509 3460 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 CLEC18AA5D8T8 446 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 GABRR3A8MPY1 467 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 PRAMEF2O60811 474 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 SHBGP04278 402 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 TAC1P20366 129 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 TNFRSF8P28908 595 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 STX4Q12846 297 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 TRAF3Q13114 568 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 TUBA3CQ13748 450 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 FHL5Q5TD97 284 aa28.73■■■□□ 2.19
CMTM4-204ENST00000563952 TUBA3EQ6PEY2 450 aa28.73■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms