RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 WDR49Q8IV35 697 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 NELFCDQ8IXH7 590 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 RASGEF1CQ8N431 466 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 C10orf53Q8N6V4 93 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GOLGA5Q8TBA6 731 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 HDAC11Q96DB2 347 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 ZNF354BQ96LW1 612 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 PGLYRP2Q96PD5 576 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 GSDMAQ96QA5 445 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 S1PR5Q9H228 398 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 DENND2DQ9H6A0 471 aaPredicted RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 RBAKQ9NYW8 714 aaPredicted RBP4.53□□□□□ -1.68
LINC00254-201ENST00000563416 TRAF3IP3Q9Y228 551 aa4.53□□□□□ -1.68
LINC00254-201ENST00000563416 NYNRINQ9P2P1 1898 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ARHGEF37A1IGU5 675 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 H0YAE9 185 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CCDC188H7C350 402 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CLIC2O15247 247 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 MAPK13O15264 365 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ADAM12O43184 909 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 KINO60870 393 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CAVIN2O95810 425 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 MT-ND3P03897 115 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 NR3C1P04150 777 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ACADLP28330 430 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 HOXA9P31269 272 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CCR10P46092 362 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TAF6P49848 677 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 NPY4RP50391 375 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 RAB28P51157 221 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 YWHAHQ04917 246 aaPredicted RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ENPEPQ07075 957 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 AP1B1Q10567 949 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 RBM39Q14498 530 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF658Q5TYW1 1059 aaPredicted RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ZDHHC20Q5W0Z9 365 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CENPPQ6IPU0 288 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 PACS1Q6VY07 963 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 C15orf39Q6ZRI6 1047 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TPRG1Q6ZUI0 275 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 Q75L30 129 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 LONP2Q86WA8 852 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ZC3H3Q8IXZ2 948 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 C1orf52Q8N6N3 182 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 LRRC52Q8N7C0 313 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TC2NQ8N9U0 490 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TSPAN14Q8NG11 270 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 OR5B17Q8NGF7 314 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 SPATA18Q8TC71 538 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 PTPMT1Q8WUK0 201 aaPredicted RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 PTP4A1Q93096 173 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ARSGQ96EG1 525 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 STAMBPL1Q96FJ0 436 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 OXNAD1Q96HP4 312 aaPredicted RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 CCDC114Q96M63 670 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ZNF560Q96MR9 790 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 PI4K2AQ9BTU6 479 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 FUT8Q9BYC5 575 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 MTMR12Q9C0I1 747 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 TFB2MQ9H5Q4 396 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 RMND1Q9NWS8 449 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 DDX43Q9NXZ2 648 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 DPP3Q9NY33 737 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 HOOK1Q9UJC3 728 aaKnown RBP4.52□□□□□ -1.69
LINC00254-201ENST00000563416 ITGA11Q9UKX5 1188 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 WDFY4Q6ZS81 3184 aa4.52□□□□□ -1.69
LINC00254-201ENST00000563416 EML5Q05BV3 1969 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 ATG2BQ96BY7 2078 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 A0A0G2JNG1 304 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 LNP1A1A4G5 178 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 LRRIQ3A6PVS8 624 aaPredicted RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 KPNA7A9QM74 516 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 LOC730098B7Z3J9 87 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 CALUO43852 315 aaPredicted RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 PRKNO60260 465 aaPredicted RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 CTSVO60911 334 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 SIX3O95343 332 aaPredicted RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 SMC2O95347 1197 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 INHBAP08476 426 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 ODC1P11926 461 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 HLA-DPA1P20036 260 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 OR1D2P34982 312 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 CA8P35219 290 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 TIMP3P35625 211 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 PPP1R2P41236 205 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 MTHFRP42898 656 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 GLIPR1P48060 266 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 CASP4P49662 377 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 AP3M2P53677 418 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 TFAMQ00059 246 aaKnown RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 LRRC63Q05C16 580 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 PTK6Q13882 451 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 KIR2DS5Q14953 304 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 MEP1AQ16819 746 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 C1orf220Q5T0J3 134 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 RARS2Q5T160 578 aaKnown RBP4.51□□□□□ -1.69
LINC00254-201ENST00000563416 ARMC4Q5T2S8 1044 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 TPGS2Q68CL5 300 aa4.51□□□□□ -1.69
LINC00254-201ENST00000563416 SLC35E4Q6ICL7 350 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms