RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 CDCA3Q99618 268 aaPredicted RBP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 LRRC2Q9BYS8 371 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 BARHL1Q9BZE3 327 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 RAB17Q9H0T7 212 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 THAP2Q9H0W7 228 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 ZNF665Q9H7R5 613 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 TAS2R3Q9NYW6 316 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 HACD3Q9P035 362 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 TMEM181Q9P2C4 612 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 KCNN3Q9UGI6 736 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 PILRAQ9UKJ1 303 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 SATB2Q9UPW6 733 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 ATG4BQ9Y4P1 393 aa2.84□□□□□ -1.95
SHCBP1-202ENST00000563219 KIF26BQ2KJY2 2108 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 A0A087X002 238 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 MEIOCA2RUB1 952 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM89A2RUT3 159 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 OGTO15294 1046 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 SYT7O43581 403 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 LRCH4O75427 683 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 SCGB2A1O75556 95 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PGK2P07205 417 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 HEXBP07686 556 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 YES1P07947 543 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 HMBSP08397 361 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF26P17031 533 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 IL10P22301 178 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 CTNNA2P26232 953 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 ELAVL4P26378 380 aaKnown RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 OR1D2P34982 312 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 MTTPP55157 894 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PRKCEQ02156 737 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 DUSP5Q16690 384 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 RAET1GQ6H3X3 334 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 DLEU7Q6UYE1 221 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 RBM43Q6ZSC3 357 aaKnown RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TRMT11Q7Z4G4 463 aaKnown RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 ADGRD2Q7Z7M1 963 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 CCDC60Q8IWA6 550 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TEX9Q8N6V9 391 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TMEM178AQ8NBL3 297 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 FCGR1BQ92637 280 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC35C1Q96A29 364 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF486Q96H40 463 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 GMPPAQ96IJ6 420 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PRAC1Q96KF2 57 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 C10orf90Q96M02 699 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TAAR6Q96RI8 345 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 FUNDC2Q9BWH2 189 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 EGLN1Q9GZT9 426 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 NYXQ9GZU5 481 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 WWTR1Q9GZV5 400 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 FAM49AQ9H0Q0 323 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TSPYL1Q9H0U9 437 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PALMDQ9NP74 551 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 ATAD3AQ9NVI7 634 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 DBF4Q9UBU7 674 aaPredicted RBP2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 NARFQ9UHQ1 456 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PILRBQ9UKJ0 227 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 TSPAN16Q9UKR8 245 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 PYGO1Q9Y3Y4 419 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 OR1A2Q9Y585 309 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 NOTCH3Q9UM47 2321 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 IL16Q14005 1332 aa2.83□□□□□ -1.96
SHCBP1-202ENST00000563219 A0A087WUV0 522 aaPredicted RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 EEF2KO00418 725 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 MPHOSPH10O00566 681 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 CPLX1O14810 134 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 CYTIPO60759 359 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ZG16O60844 167 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SAP30O75446 220 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ZFAND5O76080 213 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TRIM16O95361 564 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SERPINB2P05120 415 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 LYNP07948 512 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TPBGLP0DKB5 382 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 PRKAR1AP10644 381 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 GNSP15586 552 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 RPL35AP18077 110 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ARF4P18085 180 aaPredicted RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 FUT1P19526 365 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 PKLRP30613 574 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 OR3A3P47888 321 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SLC6A12P48065 614 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 TKTL1P51854 596 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ATP12AP54707 1039 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 DCDC1P59894 354 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 PMP22Q01453 160 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SPP2Q13103 211 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 HNRNPDQ14103 355 aaKnown RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 GAMTQ14353 236 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 RFTN1Q14699 578 aaPredicted RBP2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 HEPACAMQ14CZ8 416 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 SPHARQ15513 63 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 ZNF74Q16587 644 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 STX1AQ16623 288 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 WSCD2Q2TBF2 565 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 USH1GQ495M9 461 aa2.82□□□□□ -1.96
SHCBP1-202ENST00000563219 GPAT3Q53EU6 434 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms