RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 SOCS6O14544 535 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 DYNC1I1O14576 645 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PIP5K1BO14986 540 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 B3GALT2O43825 422 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 B4GALT2O60909 372 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 SEMA3DO95025 777 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 ALBP02768 609 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 KLK1P06870 262 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 LINC00032P0C843 101 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PPP2R1BP30154 601 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 OTX2P32243 289 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 SERPINB5P36952 375 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 FOLR3P41439 243 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 RAP1GDS1P52306 607 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 MTTPP55157 894 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 RAB38P57729 211 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 RPS15P62841 145 aaKnown RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 CXADRP78310 365 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 OCRLQ01968 901 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 RHAGQ02094 409 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 CDC20Q12834 499 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 CSTF3Q12996 717 aaKnown RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 CHAF1BQ13112 559 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 SLAMF1Q13291 335 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PRSS53Q2L4Q9 553 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 COL28A1Q2UY09 1125 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 XKR7Q5GH72 579 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 CPZQ66K79 652 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 INO80CQ6PI98 192 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 CCDC81Q6ZN84 652 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 LRRC69Q6ZNQ3 347 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 CHSY3Q70JA7 882 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 MAVSQ7Z434 540 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 TRIM46Q7Z4K8 759 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 GOLGA6L1Q8N7Z2 621 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PPP1R14CQ8TAE6 165 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 CHTF18Q8WVB6 975 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 ZNF75CPQ92670 426 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 KIAA1143Q96AT1 154 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 MIEF2Q96C03 454 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 FAR2Q96K12 515 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PPP1R36Q96LQ0 422 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 MAGEB10Q96LZ2 347 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 SERINC2Q96SA4 455 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 TBCDQ9BTW9 1192 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 EBPLQ9BY08 206 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 DDX31Q9H8H2 851 aaKnown RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 MANSC1Q9H8J5 431 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 SLCO1B3Q9NPD5 702 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 MKKSQ9NPJ1 570 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 NECTIN3Q9NQS3 549 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 GPN3Q9UHW5 284 aaPredicted RBP9.22□□□□□ -0.93
CLK3-208ENST00000562626 HAO1Q9UJM8 370 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 ATG4BQ9Y4P1 393 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 HS3ST3B1Q9Y662 390 aa9.22□□□□□ -0.93
CLK3-208ENST00000562626 ATP6AP2A0A1C7CYW4 349 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 A0A1W2PR48 441 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 URADA6NGE7 173 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 CRCPO75575 148 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 AIFM1O95831 613 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 FHP07954 510 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 CELA2AP08217 269 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 PIM1P11309 404 aaPredicted RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 NEFHP12036 1026 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 HSD3B1P14060 373 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 MAOAP21397 527 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 GRK2P25098 689 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 TACR1P25103 407 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 HSD3B2P26439 372 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 PHEXP78562 749 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 ID2Q02363 134 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 OCA2Q04671 838 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 EEF1A2Q05639 463 aaKnown RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 VAC14Q08AM6 782 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 ATP1A4Q13733 1029 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 KIAA0040Q15053 153 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 PDCD2Q16342 344 aaPredicted RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 UGT8Q16880 541 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 AP5B1Q2VPB7 878 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 KIRREL2Q6UWL6 708 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 CLNKQ7Z7G1 428 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 MRGPREQ86SM8 312 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 NUDT13Q86X67 352 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 CLYBLQ8N0X4 340 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 ZCCHC7Q8N3Z6 543 aaKnown RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 NUDT8Q8WV74 236 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 TBC1D20Q96BZ9 403 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 CRB3Q9BUF7 120 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 NPLQ9BXD5 320 aaPredicted RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 ACBD3Q9H3P7 528 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 PRORYQ9H606 182 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 COPS7BQ9H9Q2 264 aaPredicted RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 C5AR2Q9P296 337 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 HEY2Q9UBP5 337 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 VPS29Q9UBQ0 182 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 MARCOQ9UEW3 520 aaPredicted RBP9.21□□□□□ -0.94
CLK3-208ENST00000562626 C3orf18Q9UK00 162 aa9.21□□□□□ -0.94
CLK3-208ENST00000562626 KCND3Q9UK17 655 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms