RNA–Protein interactions for RNA: ENST00000562118.1

CDH1-204, Transcript of cadherin 1, humanhuman

TSL 2

Gene CDH1, Length 952 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-204ENST00000562118 DDX39BQ13838 428 aaKnown RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 TBR1Q16650 682 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 C19orf48Q6RUI8 117 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 ZCCHC23Q6ZST2 131 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 NUDCD3Q8IVD9 361 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 TMEM52Q8NDY8 209 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 OR11G2Q8NGC1 345 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 RAB3IL1Q8TBN0 382 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 CHTF18Q8WVB6 975 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 SELENOMQ8WWX9 145 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 PEX11GQ96HA9 241 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 FCRL1Q96LA6 429 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 WDR77Q9BQA1 342 aaPredicted RBP12.64□□□□□ -0.39
CDH1-204ENST00000562118 CENPKQ9BS16 269 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 TUBB1Q9H4B7 451 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 MMACHCQ9Y4U1 282 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 DNAJC15Q9Y5T4 150 aa12.64□□□□□ -0.39
CDH1-204ENST00000562118 A0A0G2JN53 185 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TCRBV16S1A1N1A0A5B0 115 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 CDC14CA4D256 554 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 SYNDIG1LA6NDD5 238 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 KLF11O14901 512 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 AZIN1O14977 448 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TMPRSS11DO60235 418 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 SNNO75324 88 aaPredicted RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 ALOX12BO75342 701 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 PRKAR1AP10644 381 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 COX6A1P12074 109 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 SSR2P43308 183 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 HNRNPFP52597 415 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 EMP2P54851 167 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 HSD17B7P56937 341 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 IGLV3-21P80748 117 aaPredicted RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 ATP1A4Q13733 1029 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 KIAA0040Q15053 153 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 AP5B1Q2VPB7 878 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 XKR7Q5GH72 579 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TTC19Q6DKK2 380 aaPredicted RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 SHISA6Q6ZSJ9 500 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 COMMD6Q7Z4G1 85 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 NUDT13Q86X67 352 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 ZNF595Q8IYB9 648 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TMEM102Q8N9M5 508 aaPredicted RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 LSM14AQ8ND56 463 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 SREK1Q8WXA9 508 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 CSF3RQ99062 836 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 SORT1Q99523 831 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 MAPKAP1Q9BPZ7 522 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 MESP1Q9BRJ9 268 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 SORBS1Q9BX66 1292 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 MRPL1Q9BYD6 325 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 C20orf27Q9GZN8 174 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 ZNF700Q9H0M5 742 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 EML4Q9HC35 981 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 MLXIPLQ9NP71 852 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 P4HTMQ9NXG6 502 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 MS4A12Q9NXJ0 267 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 VPS29Q9UBQ0 182 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TUBD1Q9UJT1 453 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 MKL2Q9ULH7 1088 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 TIMM22Q9Y584 194 aa12.63□□□□□ -0.39
CDH1-204ENST00000562118 TNRC6AQ8NDV7 1962 aaKnown RBP12.63□□□□□ -0.39
CDH1-204ENST00000562118 IGHV1-45A0A0A0MS14 117 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 TGFBR3LH3BV60 316 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 SAP18O00422 153 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 PROM1O43490 865 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 RSL1D1O76021 490 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 CHN1P15882 459 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 HMOX2P30519 316 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 ARL1P40616 181 aaPredicted RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 RAP1GDS1P52306 607 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 HNRNPH2P55795 449 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 TRA2BP62995 288 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 RAE1P78406 368 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 TNFRSF17Q02223 184 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 PCOLCEQ15113 449 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 CHI3L2Q15782 390 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 DCAF10Q5QP82 559 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 BORAQ6PGQ7 559 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 FAM76AQ8TAV0 307 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.62□□□□□ -0.39
CDH1-204ENST00000562118 APOBEC4Q8WW27 367 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 ZBTB9Q96C00 473 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 MTFMTQ96DP5 389 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 IMMP1LQ96LU5 166 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 COPS7BQ9H9Q2 264 aaPredicted RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 KCNK9Q9NPC2 374 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 NMRK1Q9NWW6 199 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 LYARQ9NX58 379 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 ZDHHC2Q9UIJ5 367 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 PPIEQ9UNP9 301 aaKnown RBP12.62□□□□□ -0.39
CDH1-204ENST00000562118 MAN2B2Q9Y2E5 1009 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 TRAF6Q9Y4K3 522 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 ATRXP46100 2492 aa12.62□□□□□ -0.39
CDH1-204ENST00000562118 FAM227AF5H4B4 570 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ATP8B1O43520 1251 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 ITM2AO43736 263 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 HPP00738 406 aa12.61□□□□□ -0.39
CDH1-204ENST00000562118 HEXBP07686 556 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms