RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 HUS1BQ8NHY5 278 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 PHF21BQ96EK2 531 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 CSF3RQ99062 836 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 NPAS2Q99743 824 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 MRPL46Q9H2W6 279 aaKnown RBP14.5□□□□□ -0.09
CCDC113-203ENST00000561517 ACTR8Q9H981 624 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 PRTFDC1Q9NRG1 225 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 PCTPQ9UKL6 214 aa14.5□□□□□ -0.09
CCDC113-203ENST00000561517 MRPS33Q9Y291 106 aaKnown RBP14.5□□□□□ -0.09
CCDC113-203ENST00000561517 SYNDIG1LA6NDD5 238 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 OR5H15A6NDH6 313 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 A8MUI8 341 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 TGFBR3LH3BV60 316 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 RTCAO00442 366 aaKnown RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 SMIM24O75264 130 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 CBX6O95503 412 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 MYBL2P10244 700 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 HIST1H1TP22492 207 aaPredicted RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 ARFIP1P53367 373 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 TERF2Q15554 542 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 MEP1AQ16819 746 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 FCRLBQ6BAA4 426 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 MYLK4Q86YV6 388 aaPredicted RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 CRLF3Q8IUI8 442 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 GSPT2Q8IYD1 628 aaKnown RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 CYP4X1Q8N118 509 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 LGI4Q8N135 537 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 RNF175Q8N4F7 328 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 FAM26EQ8N5C1 309 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 ACOT4Q8N9L9 421 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 FAM47BQ8NA70 645 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 WDR20Q8TBZ3 569 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 REPS1Q96D71 796 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 MAGEB10Q96LZ2 347 aaPredicted RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 NTMT1Q9BV86 223 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 OR51B5Q9H339 312 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 ZBTB26Q9HCK0 441 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 DMRT3Q9NQL9 472 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 AGPAT4Q9NRZ5 378 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 PSD3Q9NYI0 1048 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 PPIEQ9UNP9 301 aaKnown RBP14.49□□□□□ -0.09
CCDC113-203ENST00000561517 RNF11Q9Y3C5 154 aa14.49□□□□□ -0.09
CCDC113-203ENST00000561517 GTF3C1Q12789 2109 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 IQANK1A0A1B0GTG1 560 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 CDK2AP1O14519 115 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 OR7A17O14581 309 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 CTNSO60931 367 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 SH3BGRLO75368 114 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 F10P00742 488 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 RPS17P08708 135 aaKnown RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 TNFRSF8P28908 595 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 TAS2R50P59544 299 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 SLC13A2Q13183 592 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 MRPL49Q13405 166 aaKnown RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 DDX39BQ13838 428 aaKnown RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 NR6A1Q15406 480 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 INAQ16352 499 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 CPSF6Q16630 551 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 AP5B1Q2VPB7 878 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 TEX35Q5T0J7 233 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 OR4C11Q6IEV9 310 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 LCA5Q86VQ0 697 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 BEST3Q8N1M1 668 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 KIF2BQ8N4N8 673 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 SLC5A8Q8N695 610 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 GRHL3Q8TE85 626 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 FAR1Q8WVX9 515 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 RGMAQ96B86 450 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 MTERF1Q99551 399 aaKnown RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 MAPKAP1Q9BPZ7 522 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 C1QTNF3Q9BXJ4 246 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 NOL11Q9H8H0 719 aaKnown RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 PSMC3IPQ9P2W1 217 aaPredicted RBP14.48□□□□□ -0.09
CCDC113-203ENST00000561517 PPT2Q9UMR5 302 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 CROCCQ5TZA2 2017 aa14.48□□□□□ -0.09
CCDC113-203ENST00000561517 MYO7BQ6PIF6 2116 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 BLACEA4D250 179 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 A8MT66 165 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 A8MUA0 341 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 FOXE1O00358 373 aaPredicted RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 SAP18O00422 153 aaKnown RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 PLPP1O14494 284 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 MAN1A2O60476 641 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 CLDN9O95484 217 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 PTX3P26022 381 aaPredicted RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 SSR2P43308 183 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 GPR143P51810 404 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 CCNG1P51959 295 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 RPS13P62277 151 aaKnown RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 PHEXP78562 749 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 TRAF3Q13114 568 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 ZRSR2Q15696 482 aaKnown RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 RPS19BP1Q86WX3 136 aaKnown RBP14.47□□□□□ -0.09
CCDC113-203ENST00000561517 ARMC10Q8N2F6 343 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 APCDD1LQ8NCL9 501 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 B3GNT7Q8NFL0 401 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 OR52B6Q8NGF0 335 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 ACMSDQ8TDX5 336 aa14.47□□□□□ -0.09
CCDC113-203ENST00000561517 MZB1Q8WU39 189 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms