RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 IL7RP16871 459 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 RHCEP18577 417 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 EN2P19622 333 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 PCMT1P22061 227 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 NTSR1P30989 418 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 GRK3P35626 688 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 CLK3P49761 638 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 CRYBA2P53672 197 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 KIAA1024LP59773 190 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SLC35A2P78381 396 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SGCGQ13326 291 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 RAPSNQ13702 412 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 MAD2L1BPQ15013 274 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 NEDD8Q15843 81 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 MEP1AQ16819 746 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 MPEG1Q2M385 716 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 CTU2Q2VPK5 515 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 ADPRMQ3LIE5 342 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 ATAT1Q5SQI0 421 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 GPR107Q5VW38 600 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PRAMEF8Q5VWM4 474 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PRAMEF7Q5VXH5 474 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SDE2Q6IQ49 451 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 LAIR2Q6ISS4 152 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 WASH2PQ6VEQ5 465 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 TMEM64Q6YI46 380 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 USP30Q70CQ3 517 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 HS3ST5Q8IZT8 346 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 DEPDC4Q8N2C3 294 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PARP8Q8N3A8 854 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 ZNF513Q8N8E2 541 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 OR4C15Q8NGM1 316 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SPPL2AQ8TCT8 520 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SFXN5Q8TD22 340 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 GAB3Q8WWW8 586 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 TM4SF18Q96CE8 201 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 MRPL38Q96DV4 380 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 TPD52L3Q96J77 140 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 CAMK1GQ96NX5 476 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 DPH2Q9BQC3 489 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 TRMT61BQ9BVS5 477 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 ZNF717Q9BY31 904 aaPredicted RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 BTBD1Q9H0C5 482 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 RIBC2Q9H4K1 309 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 TMEM184CQ9NVA4 438 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 NDUFAF4Q9P032 175 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 TAAR2Q9P1P5 351 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 SLC23A2Q9UGH3 650 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 EBF1Q9UH73 591 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PSME2Q9UL46 239 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 CDC14AQ9UNH5 594 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PCDHGA2Q9Y5H1 932 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 ENPP4Q9Y6X5 453 aa9.25□□□□□ -0.93
RTF1-206ENST00000560447 PRRC2BQ5JSZ5 2229 aaKnown RBP9.25□□□□□ -0.93
RTF1-206ENST00000560447 MYO7AQ13402 2215 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 HEATR5BQ9P2D3 2071 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 TOR1BO14657 336 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 MPZL2O60487 215 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 OXSR1O95747 527 aaPredicted RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 AVPP01185 164 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 NTRK1P04629 796 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 HTR1AP08908 422 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 LAMP2P13473 410 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 PRKACGP22612 351 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 RPL10P27635 214 aaKnown RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 GDI1P31150 447 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 RRM2P31350 389 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 KIR2DL1P43626 348 aaPredicted RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 XCR1P46094 333 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 LIMS1P48059 325 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 PCBP4P57723 403 aaKnown RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 SMIM11AP58511 58 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 CSNK1G2P78368 415 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 HPCAP84074 193 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 TGM3Q08188 693 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 NFATC3Q12968 1075 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 GNA13Q14344 377 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SF1Q15637 639 aaKnown RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 ZIC1Q15915 447 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SLC5A12Q1EHB4 618 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 MICAQ29983 383 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 UAP1L1Q3KQV9 507 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SYT6Q5T7P8 510 aaPredicted RBP9.24□□□□□ -0.93
RTF1-206ENST00000560447 OR4C11Q6IEV9 310 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 BHLHB9Q6PI77 547 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 SYCE2Q6PIF2 218 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 PRSS48Q7RTY5 328 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 ZNF605Q86T29 641 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 FAM124AQ86V42 546 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 LINC00471Q8N535 108 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 ANKRD53Q8N9V6 530 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 ZNF740Q8NDX6 193 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 NFKBIDQ8NI38 313 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 NR4A3Q92570 626 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 RORBQ92753 470 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 TAMM41Q96BW9 452 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 CHFRQ96EP1 664 aa9.24□□□□□ -0.93
RTF1-206ENST00000560447 C12orf66Q96MD2 445 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms