RNA–Protein interactions for RNA: ENST00000560196.5

ZEB1-218, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 1,014 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-218ENST00000560196 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 ABHD13Q7L211 337 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 KANSL1Q7Z3B3 1105 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 SPPL2CQ8IUH8 684 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 DTWD1Q8N5C7 304 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 TMEM105Q8N8V8 129 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 KCT2Q8NC54 265 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 PAPD5Q8NDF8 572 aaKnown RBP13.73□□□□□ -0.21
ZEB1-218ENST00000560196 OR8K5Q8NH50 307 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 PSMA8Q8TAA3 256 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 NRG4Q8WWG1 115 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 AURKBQ96GD4 344 aaPredicted RBP13.73□□□□□ -0.21
ZEB1-218ENST00000560196 TCTN2Q96GX1 697 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 NSMCE2Q96MF7 247 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 FCRL4Q96PJ5 515 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 SERINC2Q96SA4 455 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 MACROD1Q9BQ69 325 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 NLNQ9BYT8 704 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 RAD21L1Q9H4I0 556 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 COPS7BQ9H9Q2 264 aaPredicted RBP13.73□□□□□ -0.21
ZEB1-218ENST00000560196 CCM2LQ9NUG4 571 aaPredicted RBP13.73□□□□□ -0.21
ZEB1-218ENST00000560196 TMEM74BQ9NUR3 256 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 TEX10Q9NXF1 929 aaPredicted RBP13.73□□□□□ -0.21
ZEB1-218ENST00000560196 NLGN3Q9NZ94 848 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 GON4LQ3T8J9 2241 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 CROCCQ5TZA2 2017 aa13.73□□□□□ -0.21
ZEB1-218ENST00000560196 LOC105369274A0A096LPK9 316 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 A0A0G2JN53 185 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 LOC102723532A0A0G2JNH3 316 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 A0A1B0GTQ1 180 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 DHRS12A0PJE2 317 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 TLCD2A6NGC4 264 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 SRPX2O60687 465 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 STATHP02808 62 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 CAPNS1P04632 268 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 ZNF888P0CJ79 500 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 GLB1P16278 677 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 HOXB6P17509 224 aaKnown RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 EPHA8P29322 1005 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 RAB8AP61006 207 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 PPP1CAP62136 330 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 BTN3A2P78410 334 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 BNIP3Q12983 259 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 GAB1Q13480 694 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 ZNF528Q3MIS6 628 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 FRMPD2BQ6IN97 320 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 TMEM214Q6NUQ4 689 aaKnown RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 ADGRG5Q8IZF4 528 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 OR4N4Q8N0Y3 316 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 MMP21Q8N119 569 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 DNAJC22Q8N4W6 341 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 CEP76Q8TAP6 659 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 CIDECQ96AQ7 238 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 SLCO4A1Q96BD0 722 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 ZBED6CLQ96FA7 236 aaPredicted RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 DUSP23Q9BVJ7 150 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 TRIM4Q9C037 500 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 CHST8Q9H2A9 424 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 RPF2Q9H7B2 306 aaKnown RBP13.72□□□□□ -0.21
ZEB1-218ENST00000560196 NEUROD4Q9HD90 331 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 PHF11Q9UIL8 331 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 RIMS3Q9UJD0 308 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 USP22Q9UPT9 525 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 SLC22A7Q9Y694 548 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 RNF215Q9Y6U7 377 aa13.72□□□□□ -0.21
ZEB1-218ENST00000560196 MDC1Q14676 2089 aaKnown RBP13.71□□□□□ -0.21
ZEB1-218ENST00000560196 TP53BP1Q12888 1972 aaPredicted RBP13.71□□□□□ -0.21
ZEB1-218ENST00000560196 A0A1W2PR48 441 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 GSTA4O15217 222 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 PROM1O43490 865 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 KRT75O95678 551 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 RETP07949 1114 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ALOX12P18054 663 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 IL1RNP18510 177 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 EFNA1P20827 205 aaPredicted RBP13.71□□□□□ -0.21
ZEB1-218ENST00000560196 IL10P22301 178 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 UQCRC2P22695 453 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 PSMA4P25789 261 aaKnown RBP13.71□□□□□ -0.21
ZEB1-218ENST00000560196 CERS1P27544 350 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ALDH9A1P49189 494 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 SESN3P58005 492 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 VAC14Q08AM6 782 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 FADDQ13158 208 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 IRGCQ6NXR0 463 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ZNF551Q7Z340 670 aaPredicted RBP13.71□□□□□ -0.21
ZEB1-218ENST00000560196 SLC35F3Q8IY50 421 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 CSNK1A1LQ8N752 337 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 OR6C4Q8NGE1 309 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 OR52N2Q8NGI0 321 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ZFP28Q8NHY6 868 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 CANT1Q8WVQ1 401 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ZDHHC12Q96GR4 267 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 ZNF285Q96NJ3 590 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 KLHL25Q9H0H3 589 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 VCX3BQ9H321 246 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 PIF1Q9H611 641 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 EPS8L2Q9H6S3 715 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 LYRM4Q9HD34 91 aa13.71□□□□□ -0.21
ZEB1-218ENST00000560196 SLC35C2Q9NQQ7 365 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms